C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560630 RP11-325E5.4-001 ENSG00000259545 9606 - 15:49177610-49178741 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLungOvaryTestisENST00000560630
Transcript ID Adrenal Brain Breast Colon Heart Kidney Lung Ovary Testis
ENST00000560630 0.051±0.00 0.176±0.15 0.099±0.00 0.057±0.03 0.047±0.00 0.692±0.67 0.068±0.00 0.634±0.00 0.163±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QE CIL_0004QE_0002 CGP 15:49106068-49367869
CIL_0002E2 CIL_0002E2_0001 CGP 15:49155656-49620931

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119496 Gm10224-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000105169 Gm4294-201 processed_pseudogene Mus_musculus 0 436
ENSMUST00000088480 Rpl15-ps3-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000112598 Rpl15-005 protein_coding Mus_musculus 0 436
ENSMUST00000079419 Rpl15-004 protein_coding Mus_musculus 0 436
ENSMUST00000100799 Rpl15-002 protein_coding Mus_musculus 0 436
ENSMUST00000080281 Rpl15-001 protein_coding Mus_musculus 0 436
ENSMUST00000081993 Gm10020-201 protein_coding Mus_musculus 0 431
ENSMUST00000184247 Rpl15-ps2-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000120953 Gm13413-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000121621 Gm12726-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000117717 Gm14094-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000189382 RP23-277E3.1-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000122161 Gm16210-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000121890 Gm12035-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000073317 Gm5292-001 processed_pseudogene Mus_musculus 0 267
ENSMUST00000120694 Rpl15-ps1-001 processed_pseudogene Mus_musculus 3.00004e-41 172

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