C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TIMELESS interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000561773 TIPIN-006 ENSG00000075131 9606 - 15:66379270-66386707 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverMusclePlacentaENST00000561773
Transcript ID Bladder Breast Colon Heart Kidney Liver Muscle Placenta
ENST00000561773 0.460±0.00 0.800±0.00 0.697±0.10 0.223±0.00 0.858±0.00 0.811±0.00 0.460±0.39 0.369±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057885 Rpl9-001 protein_coding Mus_musculus 0 688
ENSMUST00000078034 Rpl9-ps6-201 protein_coding Mus_musculus 0 682
ENSMUST00000120094 Rpl9-007 protein_coding Mus_musculus 0 680
ENSMUST00000140507 Rpl9-ps7-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000075549 Rpl9-ps4-201 processed_pseudogene Mus_musculus 0 673
ENSMUST00000080545 Gm5451-201 processed_pseudogene Mus_musculus 0 662
ENSMUST00000182502 Rpl9-ps1-002 protein_coding Mus_musculus 0 625
ENSMUST00000117199 Rpl9-ps1-001 translated_processed_pseudogene Mus_musculus 0 625
ENSMUST00000119147 Rpl9-ps3-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000121601 Gm12110-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000118543 Rpl9-006 protein_coding Mus_musculus 0 575
ENSMUST00000119091 Gm8087-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000120661 Gm9159-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000173020 Gm5227-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000117749 Gm11462-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000147660 Rpl9-004 retained_intron Mus_musculus 0 462
ENSMUST00000117730 Gm7206-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000122349 Gm12738-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000140879 Rpl9-010 retained_intron Mus_musculus 1.96182e-44 183
ENSMUST00000128074 Rpl9-002 retained_intron Mus_musculus 1.96182e-44 183
ENSMUST00000129885 Gm14562-001 processed_pseudogene Mus_musculus 3e-37 159

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