C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592379 AD000091.3-001 ENSG00000267135 9606 - 19:15611623-15611909 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000592379
Transcript ID Ovary
ENST00000592379 0.277±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019Y CIL_00019Y_0001 CGP 19:15508493-15630638

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102483 Rpl23a-001 protein_coding Mus_musculus 0 335
ENSMUST00000120313 Gm5384-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000104925 Rpl23a-ps3-201 protein_coding Mus_musculus 0 322
ENSMUST00000180011 Gm8112-201 processed_pseudogene Mus_musculus 0 320
ENSMUST00000096020 Gm10335-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000099431 Gm10132-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000148102 Gm3362-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000085589 Gm6177-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000078729 Gm20900-201 processed_pseudogene Mus_musculus 0 298
ENSMUST00000127270 Rpl23a-002 retained_intron Mus_musculus 0 291
ENSMUST00000118798 Gm7312-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000085632 Rpl23a-ps1-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000119136 Gm8217-001 processed_pseudogene Mus_musculus 0 222
ENSMUST00000121008 Rpl23a-ps4-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000178439 Gm21959-201 processed_pseudogene Mus_musculus 0 215
ENSMUST00000187124 RP23-466F9.2-001 processed_pseudogene Mus_musculus 0 209
ENSMUST00000105085 Gm10923-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000187331 RP23-466F9.8-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000189660 RP23-466F9.10-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000118777 Rpl23a-ps14-001 processed_pseudogene Mus_musculus 0 198
ENSMUST00000186898 RP23-466F9.4-001 processed_pseudogene Mus_musculus 0 193
ENSMUST00000121605 Gm12322-001 processed_pseudogene Mus_musculus 0 191
ENSMUST00000187732 RP23-349I9.17-001 processed_pseudogene Mus_musculus 0 187
ENSMUST00000187984 RP23-349I9.11-001 processed_pseudogene Mus_musculus 1.96182e-44 182
ENSMUST00000191583 Rpl23a-ps11-001 processed_pseudogene Mus_musculus 7.9874e-44 180
ENSMUST00000188369 Rpl23a-ps9-001 processed_pseudogene Mus_musculus 7.9874e-44 180
ENSMUST00000187903 RP23-349I9.24-001 processed_pseudogene Mus_musculus 1.00053e-42 176
ENSMUST00000185511 Rpl23a-ps10-001 processed_pseudogene Mus_musculus 9.99967e-42 172
ENSMUST00000185244 RP23-349I9.15-001 processed_pseudogene Mus_musculus 1e-37 159
ENSMUST00000105087 Gm3940-001 processed_pseudogene Mus_musculus 2e-34 148
ENSMUST00000161498 Gm16303-001 processed_pseudogene Mus_musculus 4e-17 92

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