C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5940
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117582 Gm5940-001 ENSMUSG00000081205 10090 + X:80456742-80457809 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaTestisENSMUST00000117582
Transcript ID Bladder Brain Liver Ovary Placenta Testis
ENSMUST00000117582 0.008±0.00 0.025±0.01 0.023±0.03 0.036±0.00 0.028±0.02 0.036±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392524 HNRNPA3-001 protein_coding Homo_sapiens 0 1657
ENST00000401429 HNRNPA3P1-001 processed_pseudogene Homo_sapiens 0 1520
ENST00000411529 HNRNPA3-002 protein_coding Homo_sapiens 0 1657
ENST00000416838 HNRNPA3P3-001 processed_pseudogene Homo_sapiens 0 1498
ENST00000424470 HNRNPA3P15-001 processed_pseudogene Homo_sapiens 0 1099
ENST00000424736 RP11-512F24.1-001 processed_pseudogene Homo_sapiens 0 992
ENST00000427514 HNRNPA3P4-001 processed_pseudogene Homo_sapiens 0 990
ENST00000432457 HNRNPA3-008 protein_coding Homo_sapiens 0 230
ENST00000435711 HNRNPA3-014 protein_coding Homo_sapiens 0 1657
ENST00000437410 HNRNPA3P12-001 processed_pseudogene Homo_sapiens 0 1432
ENST00000441511 AC012513.4-001 processed_pseudogene Homo_sapiens 0 1050
ENST00000444546 HNRNPA3P14-001 processed_pseudogene Homo_sapiens 0 717
ENST00000451198 HNRNPA3P2-001 unprocessed_pseudogene Homo_sapiens 0 460
ENST00000455201 HNRNPA3P5-001 processed_pseudogene Homo_sapiens 0 1230
ENST00000472163 HNRNPA3P6-001 processed_pseudogene Homo_sapiens 0 985
ENST00000483137 HNRNPA3-012 retained_intron Homo_sapiens 0 193
ENST00000507583 RP11-395I6.1-001 processed_pseudogene Homo_sapiens 2e-23 111
ENST00000512222 HNRNPA3P13-001 processed_pseudogene Homo_sapiens 0 1280
ENST00000547726 HNRNPA3P10-001 processed_pseudogene Homo_sapiens 0 1498
ENST00000564298 HNRNPA3P11-001 processed_pseudogene Homo_sapiens 0 1029
ENST00000591842 HNRNPA3P16-001 processed_pseudogene Homo_sapiens 0 784
ENST00000604913 HNRNPA3P9-001 processed_pseudogene Homo_sapiens 0 741
ENST00000619693 CTD-3093M3.1-001 unprocessed_pseudogene Homo_sapiens 3e-23 110

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