C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12960
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120017 Gm12960-001 ENSMUSG00000100514 10090 - 4:111807358-111808423 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120017
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120017 0.598±0.33 0.165±0.08 0.578±0.62 0.742±0.35 0.192±0.12 0.276±0.16 0.444±0.28 0.723±1.33 0.690±0.46 0.026±0.02 0.451±0.55 0.147±0.09 1.070±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UZ CIL_0008UZ_0002 VISTA 4:111252851-111853446

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392524 HNRNPA3-001 protein_coding Homo_sapiens 0 1628
ENST00000397093 RP3-522P13.2-001 processed_pseudogene Homo_sapiens 0 261
ENST00000401429 HNRNPA3P1-001 processed_pseudogene Homo_sapiens 0 1491
ENST00000411529 HNRNPA3-002 protein_coding Homo_sapiens 0 1628
ENST00000416838 HNRNPA3P3-001 processed_pseudogene Homo_sapiens 0 1467
ENST00000424470 HNRNPA3P15-001 processed_pseudogene Homo_sapiens 0 1074
ENST00000424736 RP11-512F24.1-001 processed_pseudogene Homo_sapiens 0 987
ENST00000427514 HNRNPA3P4-001 processed_pseudogene Homo_sapiens 0 983
ENST00000432457 HNRNPA3-008 protein_coding Homo_sapiens 0 230
ENST00000435711 HNRNPA3-014 protein_coding Homo_sapiens 0 1628
ENST00000437410 HNRNPA3P12-001 processed_pseudogene Homo_sapiens 0 1406
ENST00000441511 AC012513.4-001 processed_pseudogene Homo_sapiens 0 1007
ENST00000444546 HNRNPA3P14-001 processed_pseudogene Homo_sapiens 0 697
ENST00000451198 HNRNPA3P2-001 unprocessed_pseudogene Homo_sapiens 0 425
ENST00000455201 HNRNPA3P5-001 processed_pseudogene Homo_sapiens 0 1199
ENST00000472163 HNRNPA3P6-001 processed_pseudogene Homo_sapiens 0 977
ENST00000483137 HNRNPA3-012 retained_intron Homo_sapiens 0 189
ENST00000507583 RP11-395I6.1-001 processed_pseudogene Homo_sapiens 2e-23 111
ENST00000512222 HNRNPA3P13-001 processed_pseudogene Homo_sapiens 0 1251
ENST00000547726 HNRNPA3P10-001 processed_pseudogene Homo_sapiens 0 1467
ENST00000564298 HNRNPA3P11-001 processed_pseudogene Homo_sapiens 0 1037
ENST00000591842 HNRNPA3P16-001 processed_pseudogene Homo_sapiens 0 750
ENST00000604913 HNRNPA3P9-001 processed_pseudogene Homo_sapiens 0 754

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