C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6793
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071732 Gm6793-201 ENSMUSG00000092086 10090 - 8:112013433-112015036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071732
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071732 0.354±0.06 0.460±0.18 0.206±0.02 0.431±0.29 0.285±0.11 0.283±0.17 0.185±0.16 0.318±0.16 0.222±0.11 0.503±0.09 0.079±0.02 0.666±0.52 0.179±0.12 0.205±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YT CIL_0003YT_0002 CGP 8:111993440-112020528

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392524 HNRNPA3-001 protein_coding Homo_sapiens 0 2202
ENST00000401429 HNRNPA3P1-001 processed_pseudogene Homo_sapiens 0 1424
ENST00000411529 HNRNPA3-002 protein_coding Homo_sapiens 0 2257
ENST00000416838 HNRNPA3P3-001 processed_pseudogene Homo_sapiens 0 1389
ENST00000424470 HNRNPA3P15-001 processed_pseudogene Homo_sapiens 0 1007
ENST00000424736 RP11-512F24.1-001 processed_pseudogene Homo_sapiens 0 1472
ENST00000427514 HNRNPA3P4-001 processed_pseudogene Homo_sapiens 0 893
ENST00000432457 HNRNPA3-008 protein_coding Homo_sapiens 0 795
ENST00000435711 HNRNPA3-014 protein_coding Homo_sapiens 0 1552
ENST00000437410 HNRNPA3P12-001 processed_pseudogene Homo_sapiens 0 1321
ENST00000441511 AC012513.4-001 processed_pseudogene Homo_sapiens 0 946
ENST00000444546 HNRNPA3P14-001 processed_pseudogene Homo_sapiens 0 634
ENST00000451198 HNRNPA3P2-001 unprocessed_pseudogene Homo_sapiens 0 446
ENST00000455201 HNRNPA3P5-001 processed_pseudogene Homo_sapiens 0 1127
ENST00000472163 HNRNPA3P6-001 processed_pseudogene Homo_sapiens 0 963
ENST00000483137 HNRNPA3-012 retained_intron Homo_sapiens 0 660
ENST00000507583 RP11-395I6.1-001 processed_pseudogene Homo_sapiens 4e-24 113
ENST00000512222 HNRNPA3P13-001 processed_pseudogene Homo_sapiens 0 1179
ENST00000547726 HNRNPA3P10-001 processed_pseudogene Homo_sapiens 0 1382
ENST00000564298 HNRNPA3P11-001 processed_pseudogene Homo_sapiens 0 935
ENST00000591842 HNRNPA3P16-001 processed_pseudogene Homo_sapiens 0 689
ENST00000604913 HNRNPA3P9-001 processed_pseudogene Homo_sapiens 0 702
ENST00000619693 CTD-3093M3.1-001 unprocessed_pseudogene Homo_sapiens 7e-24 111

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