C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 9242
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177820 Gm9242-201 ENSMUSG00000096156 10090 + 16:97490047-97491120 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonLiverMuscleOvaryPlacentaTestisENSMUST00000177820
Transcript ID Bladder Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000177820 0.025±0.02 0.814±0.80 0.181±0.05 0.253±0.09 2.158±3.04 0.045±0.00 0.032±0.00 0.050±0.05 0.189±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392524 HNRNPA3-001 protein_coding Homo_sapiens 0 1650
ENST00000397093 RP3-522P13.2-001 processed_pseudogene Homo_sapiens 0 267
ENST00000401429 HNRNPA3P1-001 processed_pseudogene Homo_sapiens 0 1513
ENST00000411529 HNRNPA3-002 protein_coding Homo_sapiens 0 1653
ENST00000416838 HNRNPA3P3-001 processed_pseudogene Homo_sapiens 0 1489
ENST00000424470 HNRNPA3P15-001 processed_pseudogene Homo_sapiens 0 1085
ENST00000424736 RP11-512F24.1-001 processed_pseudogene Homo_sapiens 0 998
ENST00000427514 HNRNPA3P4-001 processed_pseudogene Homo_sapiens 0 987
ENST00000432457 HNRNPA3-008 protein_coding Homo_sapiens 0 230
ENST00000435711 HNRNPA3-014 protein_coding Homo_sapiens 0 1650
ENST00000437410 HNRNPA3P12-001 processed_pseudogene Homo_sapiens 0 1432
ENST00000441511 AC012513.4-001 processed_pseudogene Homo_sapiens 0 1040
ENST00000444546 HNRNPA3P14-001 processed_pseudogene Homo_sapiens 0 706
ENST00000451198 HNRNPA3P2-001 unprocessed_pseudogene Homo_sapiens 0 451
ENST00000455201 HNRNPA3P5-001 processed_pseudogene Homo_sapiens 0 1221
ENST00000472163 HNRNPA3P6-001 processed_pseudogene Homo_sapiens 0 985
ENST00000483137 HNRNPA3-012 retained_intron Homo_sapiens 0 195
ENST00000507583 RP11-395I6.1-001 processed_pseudogene Homo_sapiens 4e-24 113
ENST00000512222 HNRNPA3P13-001 processed_pseudogene Homo_sapiens 0 1273
ENST00000547726 HNRNPA3P10-001 processed_pseudogene Homo_sapiens 0 1487
ENST00000564298 HNRNPA3P11-001 processed_pseudogene Homo_sapiens 0 1018
ENST00000591842 HNRNPA3P16-001 processed_pseudogene Homo_sapiens 0 778
ENST00000604913 HNRNPA3P9-001 processed_pseudogene Homo_sapiens 0 730
ENST00000619693 CTD-3093M3.1-001 unprocessed_pseudogene Homo_sapiens 7e-24 111

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