C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6506
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119775 Gm6506-001 ENSMUSG00000082233 10090 - 15:77443285-77444420 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119775
Transcript ID Bladder Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119775 0.008±0.00 0.131±0.00 0.054±0.00 0.010±0.01 0.064±0.00 0.032±0.00 0.259±0.08 0.376±0.46 0.233±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GS CIL_0003GS_0007 CGP 15:77403789-77447492
CIL_0003GS CIL_0003GS_0009 CGP 15:77422210-77491069

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392524 HNRNPA3-001 protein_coding Homo_sapiens 0 1500
ENST00000401429 HNRNPA3P1-001 processed_pseudogene Homo_sapiens 0 1358
ENST00000411529 HNRNPA3-002 protein_coding Homo_sapiens 0 1424
ENST00000416838 HNRNPA3P3-001 processed_pseudogene Homo_sapiens 0 1325
ENST00000424470 HNRNPA3P15-001 processed_pseudogene Homo_sapiens 0 942
ENST00000424736 RP11-512F24.1-001 processed_pseudogene Homo_sapiens 0 832
ENST00000427514 HNRNPA3P4-001 processed_pseudogene Homo_sapiens 0 833
ENST00000432457 HNRNPA3-008 protein_coding Homo_sapiens 0 243
ENST00000435711 HNRNPA3-014 protein_coding Homo_sapiens 0 1500
ENST00000437410 HNRNPA3P12-001 processed_pseudogene Homo_sapiens 0 1201
ENST00000441511 AC012513.4-001 processed_pseudogene Homo_sapiens 0 885
ENST00000451198 HNRNPA3P2-001 unprocessed_pseudogene Homo_sapiens 0 381
ENST00000455201 HNRNPA3P5-001 processed_pseudogene Homo_sapiens 0 1055
ENST00000472163 HNRNPA3P6-001 processed_pseudogene Homo_sapiens 0 837
ENST00000512222 HNRNPA3P13-001 processed_pseudogene Homo_sapiens 0 1122
ENST00000547726 HNRNPA3P10-001 processed_pseudogene Homo_sapiens 0 1282
ENST00000564298 HNRNPA3P11-001 processed_pseudogene Homo_sapiens 0 861
ENST00000604913 HNRNPA3P9-001 processed_pseudogene Homo_sapiens 0 645
ENST00000619693 CTD-3093M3.1-001 unprocessed_pseudogene Homo_sapiens 1e-16 88

Loading