C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 17212
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166666 Gm17212-001 ENSMUSG00000090941 10090 - 3:69335502-69335760 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartKidneyLiverTestisENSMUST00000166666
Transcript ID Adipose Brain Heart Kidney Liver Testis
ENSMUST00000166666 0.589±0.00 0.494±0.00 0.383±0.00 0.563±0.00 0.189±0.00 0.418±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004K2 CIL_0004K2_0003 CGP 3:69222419-69560802
CIL_0001Z8 CIL_0001Z8_0002 CGP 3:69316861-69598861

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000391360 RP11-347C18.1-001 processed_pseudogene Homo_sapiens 1.4013e-45 187
ENST00000396131 RPL17P50-001 processed_pseudogene Homo_sapiens 0 226
ENST00000404330 RPL17P25-001 processed_pseudogene Homo_sapiens 0 220
ENST00000442115 RP11-11M20.2-001 processed_pseudogene Homo_sapiens 1.4013e-45 187
ENST00000445757 AC007677.2-001 processed_pseudogene Homo_sapiens 0 202
ENST00000446498 RP3-476K8.4-001 processed_pseudogene Homo_sapiens 0 226
ENST00000448403 RP11-383G10.3-001 processed_pseudogene Homo_sapiens 0 230
ENST00000461464 RPL17P20-001 processed_pseudogene Homo_sapiens 0 204
ENST00000467688 RPL17P22-001 processed_pseudogene Homo_sapiens 0 230
ENST00000488371 RP11-864J10.2-001 processed_pseudogene Homo_sapiens 0 226
ENST00000498256 RPL17P33-001 processed_pseudogene Homo_sapiens 0 261
ENST00000596405 CTD-2550O8.7-001 processed_pseudogene Homo_sapiens 0 246

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