C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13464
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119418 Gm13464-001 ENSMUSG00000080994 10090 - 2:43518464-43519398 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119418
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119418 0.321±0.12 0.247±0.10 0.119±0.05 2.551±3.35 0.378±0.28 0.088±0.03 0.315±0.12 0.259±0.08 3.063±6.61 0.071±0.05 0.835±0.39 0.224±0.22 0.200±0.11 0.046±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NW CIL_0003NW_0002 CGP 2:40595248-43682715
CIL_0008RY CIL_0008RY_0002 VISTA 2:43481987-44083031

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 381
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1092
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 809
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1066
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1092
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1092
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 497
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 883
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 806
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 894
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 776
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 335
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 669
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 763
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 749
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 970
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 815
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 667
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 603
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 798
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 551
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 680
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 737
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 658
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 582
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 571
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 484
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 773
ENST00000450472 GAPDHP14-001 processed_pseudogene Homo_sapiens 0 462
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1033
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 466
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 809
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 809
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 883
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 791
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 902
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 592
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 309
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 791
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 826
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 911
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 568
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 817
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 706
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 706
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 529
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 946

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