C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0006CL_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000123607-ENSG00000144285 | CGP | 9606 | 2:165857475-166128013  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000123607  (TTC21B)tetratricopeptide repeat domain 21B |
ENST00000243344 (TTC21B-001)
|
165873362-165953843 | protein_coding | |
|
ENST00000392695 (TTC21B-003)
|
165857478-165890641 | nonsense_mediated_decay | ||
|
ENST00000464374 (TTC21B-006)
|
165928717-165953745 | retained_intron | ||
|
ENST00000476227 (TTC21B-007)
|
165949111-165953811 | retained_intron | ||
|
ENST00000484129 (TTC21B-008)
|
165898627-165907720 | retained_intron | ||
|
ENST00000486672 (TTC21B-004)
|
165857475-165871211 | retained_intron | ||
|
ENST00000489714 (TTC21B-005)
|
165857475-165870991 | processed_transcript | ||
|
ENST00000497425 (TTC21B-009)
|
165879634-165883955 | processed_transcript | ||
|
ENSG00000144285 (SCN1A) sodium channel, voltage-gated, type I, alpha subunit |
ENST00000303395 (SCN1A-001)
|
165989163-166073621 | protein_coding | |
|
ENST00000375405 (SCN1A-002)
|
165989163-166073639 | protein_coding | ||
|
ENST00000409050 (SCN1A-003)
|
165991245-166073621 | protein_coding | ||
|
ENST00000423058 (SCN1A-201)
|
165989160-166073697 | protein_coding | ||
|
ENST00000473295 (SCN1A-005)
|
165996053-166000063 | retained_intron | ||
|
ENST00000491429 (SCN1A-004)
|
165998125-166002908 | retained_intron | ||
|
ENST00000507401 (SCN1A-007)
|
166073302-166128013 | retained_intron | ||
|
ENSG00000236107 (AC010127.3) |
ENST00000447809 (AC010127.3-001)
|
166081531-166301784 | antisense | |
|
ENST00000595268 (AC010127.3-004)
|
166015680-166060458 | antisense | ||
|
ENST00000595647 (AC010127.3-003)
|
165957399-166171547 | antisense | ||
|
ENST00000597623 (AC010127.3-002)
|
165957430-166036385 | antisense | ||
|
ENST00000599041 (AC010127.3-005)
|
166036065-166171474 | antisense | ||
| CIL_0006CL_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000034848-ENSMUSG00000064329 | CGP | 10090 | 2:66184327-66440840 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000034848 (Ttc21b) tetratricopeptide repeat domain 21B |
ENSMUST00000102718 (Ttc21b-001)
|
66184327-66256617 | protein_coding | |
|
ENSMUST00000125446 (Ttc21b-003)
|
66184643-66256592 | protein_coding | ||
|
ENSMUST00000131503 (Ttc21b-002)
|
66231116-66249410 | retained_intron | ||
|
ENSMUST00000169968 (Ttc21b-004)
|
66218015-66235138 | retained_intron | ||
|
ENSMUSG00000064329 (Scn1a) sodium channel, voltage-gated, type I, alpha |
ENSMUST00000077489 (Scn1a-004)
|
66270784-66351195 | protein_coding | |
|
ENSMUST00000094951 (Scn1a-005)
|
66272884-66351177 | protein_coding | ||
|
ENSMUST00000112366 (Scn1a-001)
|
66270781-66410064 | protein_coding | ||
|
ENSMUST00000112371 (Scn1a-201)
|
66270782-66440837 | protein_coding | ||
|
ENSMUST00000129508 (Scn1a-002)
|
66348364-66440814 | processed_transcript | ||
|
ENSMUST00000138910 (Scn1a-006)
|
66335443-66440840 | protein_coding | ||
|
ENSMUST00000156865 (Scn1a-003)
|
66272892-66318139 | processed_transcript | ||
|
ENSMUSG00000085386 (Gm13630) predicted gene 13630 |
ENSMUST00000127849 (Gm13630-001)
|
66409494-66421588 | processed_transcript | |
|
ENSMUSG00000086671 (Gm13618) predicted gene 13618 |
ENSMUST00000128859 (Gm13618-001)
|
66187836-66192813 | antisense | |
Expression Patterns
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