C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424633 RPL12L3-001 ENSG00000236992 9606 - 20:19823443-19823943 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000424633
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000424633 0.273±0.00 0.512±0.00 0.147±0.00 0.647±0.00 0.624±0.00 0.034±0.00 0.075±0.00 0.068±0.00 0.251±0.00 0.822±0.00 0.247±0.14 0.231±0.08 0.127±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MY CIL_0002MY_0001 CGP 20:19212646-20002457
CIL_0007Z5 CIL_0007Z5_0001 VISTA 20:19702996-20303586

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092620 Gm10275-002 processed_transcript Mus_musculus 0 601
ENSMUST00000126610 Rpl12-001 protein_coding Mus_musculus 0 601
ENSMUST00000168697 Gm10275-001 transcribed_processed_pseudogene Mus_musculus 0 593
ENSMUST00000119608 Gm11425-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000076703 Gm9396-001 protein_coding Mus_musculus 0 577
ENSMUST00000102811 Rpl12-002 processed_transcript Mus_musculus 0 556
ENSMUST00000116168 Rpl12-ps1-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000121857 Gm15793-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000122012 Gm6285-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000071515 Gm7117-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000172474 Gm20430-001 processed_pseudogene Mus_musculus 0 243
ENSMUST00000117322 Gm12038-001 processed_pseudogene Mus_musculus 0 209
ENSMUST00000154340 Rpl12-003 processed_transcript Mus_musculus 1e-38 163
ENSMUST00000134912 Rpl12-007 processed_transcript Mus_musculus 1e-34 150
ENSMUST00000121669 Gm11745-001 processed_pseudogene Mus_musculus 8e-26 121

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