C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481802 CTC-250I14.1-001 ENSG00000213253 9606 - 19:13157959-13158788 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000481802
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000481802 0.100±0.00 0.106±0.00 0.110±0.00 0.034±0.00 0.072±0.00 0.062±0.00 0.034±0.00 0.183±0.00 0.162±0.01 0.118±0.00 1.842±1.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VV CIL_0007VV_0001 VISTA 19:12752697-13356541
CIL_0007ZV CIL_0007ZV_0001 VISTA 19:12767682-13372012

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092620 Gm10275-002 processed_transcript Mus_musculus 0 532
ENSMUST00000126610 Rpl12-001 protein_coding Mus_musculus 0 532
ENSMUST00000168697 Gm10275-001 transcribed_processed_pseudogene Mus_musculus 0 527
ENSMUST00000119608 Gm11425-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000116168 Rpl12-ps1-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000076703 Gm9396-001 protein_coding Mus_musculus 0 510
ENSMUST00000102811 Rpl12-002 processed_transcript Mus_musculus 0 499
ENSMUST00000121857 Gm15793-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000122012 Gm6285-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000071515 Gm7117-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000172474 Gm20430-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000117322 Gm12038-001 processed_pseudogene Mus_musculus 0 198
ENSMUST00000154340 Rpl12-003 processed_transcript Mus_musculus 2e-36 156
ENSMUST00000134912 Rpl12-007 processed_transcript Mus_musculus 5e-33 145
ENSMUST00000121669 Gm11745-001 processed_pseudogene Mus_musculus 8e-21 104

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