C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L12 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000432629 RPL12P4-001 ENSG00000185834 9606 + 20:55074644-55075140 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartMuscleOvaryPlacentaTestisENST00000432629
Transcript ID Adrenal Breast Heart Muscle Ovary Placenta Testis
ENST00000432629 0.038±0.00 0.040±0.00 0.034±0.00 0.098±0.00 0.487±0.17 0.233±0.14 0.119±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HD CIL_0001HD_0001 CGP 20:54475597-56005472

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092620 Gm10275-002 processed_transcript Mus_musculus 0 630
ENSMUST00000126610 Rpl12-001 protein_coding Mus_musculus 0 630
ENSMUST00000168697 Gm10275-001 transcribed_processed_pseudogene Mus_musculus 0 625
ENSMUST00000119608 Gm11425-001 processed_pseudogene Mus_musculus 0 608
ENSMUST00000076703 Gm9396-001 protein_coding Mus_musculus 0 608
ENSMUST00000116168 Rpl12-ps1-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000121857 Gm15793-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000102811 Rpl12-002 processed_transcript Mus_musculus 0 575
ENSMUST00000122012 Gm6285-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000092011 Gm16519-201 protein_coding Mus_musculus 0 518
ENSMUST00000071515 Gm7117-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000079794 Gm15732-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000121298 Rpl12-ps2-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000172474 Gm20430-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000117322 Gm12038-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000154340 Rpl12-003 processed_transcript Mus_musculus 1e-39 167
ENSMUST00000134912 Rpl12-007 processed_transcript Mus_musculus 2e-37 159
ENSMUST00000121669 Gm11745-001 processed_pseudogene Mus_musculus 6e-27 124

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