C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H2aj
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000333151 HIST1H2AJ-001 ENSG00000276368 9606 - 6:27814354-27814740 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLungOvaryTestisENST00000333151
Transcript ID Adrenal Breast Colon Heart Kidney Lung Ovary Testis
ENST00000333151 0.112±0.00 13.201±0.00 38.293±0.00 0.283±0.00 3.633±0.00 13.185±0.00 76.988±0.00 0.215±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UD CIL_0000UD_0005 CGP 6:27814354-27815424

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0008150 ND biological_process
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102969 Hist1h2ae-001 protein_coding Mus_musculus 0 488
ENSMUST00000091742 Hist1h2ah-001 protein_coding Mus_musculus 0 484
ENSMUST00000078369 Hist1h2ab-001 protein_coding Mus_musculus 0 477
ENSMUST00000171127 Hist1h2ac-001 protein_coding Mus_musculus 0 477
ENSMUST00000090776 Hist1h2ad-001 protein_coding Mus_musculus 0 472
ENSMUST00000070124 Hist1h2ai-001 protein_coding Mus_musculus 0 472
ENSMUST00000081342 Hist1h2ap-001 protein_coding Mus_musculus 0 472
ENSMUST00000091745 Hist1h2ao-001 protein_coding Mus_musculus 0 472
ENSMUST00000091751 Hist1h2an-001 protein_coding Mus_musculus 0 466
ENSMUST00000091741 Hist1h2ag-001 protein_coding Mus_musculus 0 466
ENSMUST00000078756 Hist2h2aa2-001 protein_coding Mus_musculus 0 460
ENSMUST00000074976 Hist2h2aa1-001 protein_coding Mus_musculus 0 460
ENSMUST00000073261 Hist1h2af-001 protein_coding Mus_musculus 0 460
ENSMUST00000090782 Hist2h2ac-001 protein_coding Mus_musculus 0 455
ENSMUST00000074752 Hist1h2ak-001 protein_coding Mus_musculus 0 449
ENSMUST00000091708 Hist1h2al-201 protein_coding Mus_musculus 0 449
ENSMUST00000091710 Hist1h2aj-001 unprocessed_pseudogene Mus_musculus 0 420
ENSMUST00000074556 H2afj-001 protein_coding Mus_musculus 0 403
ENSMUST00000052686 H2afx-001 protein_coding Mus_musculus 0 398
ENSMUST00000108817 Hist3h2a-001 protein_coding Mus_musculus 0 394
ENSMUST00000047697 Trim17-002 protein_coding Mus_musculus 0 394
ENSMUST00000073115 Hist2h2ab-001 protein_coding Mus_musculus 0 326
ENSDART00000110632 protein_coding Danio_rerio 0 324
ENSDART00000115109 protein_coding Danio_rerio 0 324
ENSDART00000099859 protein_coding Danio_rerio 0 322
ENSDART00000129403 protein_coding Danio_rerio 0 318
ENSDART00000129969 si:ch211-113a14.19-001 protein_coding Danio_rerio 0 313
ENSMUST00000072391 Hist1h2aa-001 protein_coding Mus_musculus 0 311
ENSDART00000126259 protein_coding Danio_rerio 0 307
ENSDART00000114908 protein_coding Danio_rerio 0 307
ENSDART00000102972 protein_coding Danio_rerio 0 298
ENSDART00000155501 protein_coding Danio_rerio 0 298
ENSDART00000103006 protein_coding Danio_rerio 0 296
ENSDART00000103013 si:ch211-113a14.19-001 protein_coding Danio_rerio 0 296
ENSDART00000108936 protein_coding Danio_rerio 0 291
ENSDART00000155060 protein_coding Danio_rerio 0 291
ENSDART00000147978 protein_coding Danio_rerio 0 291
ENSMUST00000118168 Gm11336-001 unprocessed_pseudogene Mus_musculus 0 287
ENSDART00000129239 protein_coding Danio_rerio 0 285
ENSDART00000073402 protein_coding Danio_rerio 0 279
ENSDART00000073454 protein_coding Danio_rerio 0 268

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