C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 4795
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095717 Gm4795-001 ENSMUSG00000095168 10090 + 10:45006110-45007117 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095717
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095717 0.029±0.00 0.053±0.00 0.014±0.00 0.003±0.00 0.160±0.00 0.065±0.00 0.051±0.02 0.118±0.08 0.064±0.03 0.055±0.00 0.128±0.05 0.028±0.01 0.051±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082P CIL_00082P_0002 VISTA 10:44839829-45441705
CIL_00089G CIL_00089G_0002 VISTA 10:44928613-45531786

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 318
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1079
ENST00000328713 GAPDHP24-001 processed_pseudogene Homo_sapiens 0 573
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 856
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1074
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1079
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1079
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 508
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 850
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 822
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 913
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 782
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 287
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 588
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 773
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 782
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 963
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 876
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 656
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 516
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 640
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 763
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 608
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 612
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 555
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 477
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 721
ENST00000450472 GAPDHP14-001 processed_pseudogene Homo_sapiens 0 407
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1037
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 754
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 529
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 856
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 856
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 531
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 756
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 793
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 828
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 846
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 640
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 272
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 315
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 872
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 848
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 542
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 752
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 534
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 987

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