C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15526
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112504 Gm15526-001 ENSMUSG00000080205 10090 - 6:54177480-54177683 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyLiverMuscleOvaryPlacentaENSMUST00000112504
Transcript ID Bladder Kidney Liver Muscle Ovary Placenta
ENSMUST00000112504 0.791±0.00 1.517±0.00 0.319±0.00 0.930±0.16 1.090±0.00 0.182±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZN CIL_0003ZN_0002 CGP 6:53873379-54301810
CIL_0003ZM CIL_0003ZM_0002 CGP 6:54039554-54330200

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294189 RPL29-001 protein_coding Homo_sapiens 0 292
ENST00000413677 RP4-595K12.1-001 processed_pseudogene Homo_sapiens 0 257
ENST00000440227 RPL29P7-001 processed_pseudogene Homo_sapiens 0 268
ENST00000442089 RP5-1057J7.1-001 processed_pseudogene Homo_sapiens 0 263
ENST00000443998 RP11-632C17__A.1-001 processed_pseudogene Homo_sapiens 0 292
ENST00000446953 RP1-130G2.1-001 processed_pseudogene Homo_sapiens 0 255
ENST00000451924 RP11-42D20.1-001 processed_pseudogene Homo_sapiens 0 259
ENST00000463466 RP11-874G11.1-001 processed_pseudogene Homo_sapiens 1.4013e-45 187
ENST00000465434 RPL29P24-001 processed_pseudogene Homo_sapiens 0 252
ENST00000466397 RPL29-005 protein_coding Homo_sapiens 0 292
ENST00000475248 RPL29-008 protein_coding Homo_sapiens 0 292
ENST00000478358 RP11-490G8.1-001 processed_pseudogene Homo_sapiens 0 292
ENST00000479017 RPL29-009 protein_coding Homo_sapiens 0 292
ENST00000480306 RPL29-004 nonsense_mediated_decay Homo_sapiens 2e-39 167
ENST00000481629 RPL29-003 protein_coding Homo_sapiens 9.99995e-41 171
ENST00000482584 RP11-342F17.1-001 processed_pseudogene Homo_sapiens 0 254
ENST00000486188 RPL29P23-001 processed_pseudogene Homo_sapiens 0 207
ENST00000486565 RPL29-002 retained_intron Homo_sapiens 0.0000000004 69
ENST00000486611 RPL29P3-001 processed_pseudogene Homo_sapiens 0 239
ENST00000492277 RPL29-007 protein_coding Homo_sapiens 0 292
ENST00000494408 RPL29P11-001 processed_pseudogene Homo_sapiens 0 287
ENST00000495383 RPL29-006 protein_coding Homo_sapiens 0 292
ENST00000496042 RP11-452G18.1-001 processed_pseudogene Homo_sapiens 0 200

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