C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6461
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120015 Gm6461-001 ENSMUSG00000080965 10090 - X:115443399-115444031 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000120015
Transcript ID Testis
ENSMUST00000120015 5.705±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255320 HMGB1P5-001 transcribed_processed_pseudogene Homo_sapiens 0 640
ENST00000326004 HMGB1-003 protein_coding Homo_sapiens 0 501
ENST00000339872 HMGB1-001 protein_coding Homo_sapiens 0 628
ENST00000341423 HMGB1-004 protein_coding Homo_sapiens 0 628
ENST00000395823 HMGB1P10-001 processed_pseudogene Homo_sapiens 0 553
ENST00000399489 HMGB1-009 protein_coding Homo_sapiens 0 501
ENST00000399494 HMGB1-011 protein_coding Homo_sapiens 0 628
ENST00000405805 HMGB1-012 protein_coding Homo_sapiens 0 628
ENST00000437242 HMGB1P31-001 processed_pseudogene Homo_sapiens 0 327
ENST00000439613 HMGB1P37-001 processed_pseudogene Homo_sapiens 0 479
ENST00000451497 HMGB1P5-002 processed_transcript Homo_sapiens 0 490
ENST00000452520 HMGB1P26-001 processed_pseudogene Homo_sapiens 0 473
ENST00000522557 HMGB1P1-001 processed_pseudogene Homo_sapiens 0 623
ENST00000558211 HMGB1P8-001 processed_pseudogene Homo_sapiens 0 209
ENST00000569046 RP11-673C5.1-001 processed_pseudogene Homo_sapiens 0 610
ENST00000611897 RP11-19G24.3-002 processed_transcript Homo_sapiens 4.99997e-41 171
ENST00000615653 RP11-19G24.3-001 transcribed_processed_pseudogene Homo_sapiens 0 560

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