C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14141
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120236 Gm14141-001 ENSMUSG00000082375 10090 + 2:150992182-150992964 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderKidneyLiverLungOvaryPlacentaTestisENSMUST00000120236
Transcript ID Adipose Adrenal Bladder Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000120236 0.199±0.00 0.126±0.00 0.022±0.00 0.234±0.27 0.053±0.02 0.091±0.03 0.184±0.03 0.037±0.00 1.262±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XS CIL_0000XS_0002 CGP 2:150905400-151039382
CIL_0001A4 CIL_0001A4_0002 CGP 2:150934519-151039398

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 577
ENST00000428027 RP11-534L20.4-001 processed_pseudogene Homo_sapiens 0 612
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 490
ENST00000470544 RPL7AP31-001 processed_pseudogene Homo_sapiens 0 623
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 516
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 597
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 671
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 457
ENST00000484287 RP11-613M5.1-001 processed_pseudogene Homo_sapiens 0 553
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 503
ENST00000486538 RPL7AP11-001 processed_pseudogene Homo_sapiens 0 647
ENST00000497325 CTD-2270N23.1-001 processed_pseudogene Homo_sapiens 0 643
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 699

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