C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7a pseudogene 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486538 RPL7AP11-001 ENSG00000242445 9606 + 3:121494110-121494908 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyMuscleOvaryPlacentaTestisENST00000486538
Transcript ID Adrenal Brain Breast Kidney Muscle Ovary Placenta Testis
ENST00000486538 0.329±0.00 0.154±0.00 0.148±0.00 0.173±0.00 0.216±0.00 0.050±0.01 0.106±0.03 0.032±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085365 Gm16477-001 processed_pseudogene Mus_musculus 0 857
ENSMUST00000118791 Rpl7a-ps11-001 processed_pseudogene Mus_musculus 0 852
ENSMUST00000190511 RP23-58N8.1-001 processed_pseudogene Mus_musculus 0 846
ENSMUST00000102898 Rpl7a-001 protein_coding Mus_musculus 0 846
ENSMUST00000120676 Gm12712-001 processed_pseudogene Mus_musculus 0 835
ENSMUST00000090170 Rpl7a-ps3-201 protein_coding Mus_musculus 0 835
ENSMUST00000094754 Rpl7a-ps8-201 protein_coding Mus_musculus 0 830
ENSMUST00000190579 Rpl7a-ps10-001 processed_pseudogene Mus_musculus 0 824
ENSMUST00000183380 Gm17828-001 processed_pseudogene Mus_musculus 0 808
ENSMUST00000096427 Gm17415-001 processed_pseudogene Mus_musculus 0 808
ENSMUST00000095218 Rpl7a-ps5-201 protein_coding Mus_musculus 0 802
ENSMUST00000189720 RP23-321G17.2-001 processed_pseudogene Mus_musculus 0 795
ENSMUST00000145247 Gm6286-001 processed_pseudogene Mus_musculus 0 791
ENSMUST00000191231 RP24-217I2.2-001 processed_pseudogene Mus_musculus 0 784
ENSMUST00000071565 Gm4978-201 protein_coding Mus_musculus 0 765
ENSMUST00000118638 Gm13039-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000120384 Rpl7a-ps12-001 processed_pseudogene Mus_musculus 0 734
ENSMUST00000104977 Gm4877-201 protein_coding Mus_musculus 0 732
ENSMUST00000121575 Gm12630-001 processed_pseudogene Mus_musculus 0 728
ENSMUST00000151645 Gm7847-001 processed_pseudogene Mus_musculus 0 721
ENSMUST00000185999 RP23-16N14.6-001 processed_pseudogene Mus_musculus 0 717
ENSMUST00000119589 Gm16071-001 processed_pseudogene Mus_musculus 0 715
ENSMUST00000171235 Gm5459-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000117240 Gm11989-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000119629 Gm11979-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000120236 Gm14141-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000165944 RP24-170M24.1-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000122273 Gm12269-001 processed_pseudogene Mus_musculus 0 610
ENSMUST00000119203 Gm5759-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000118766 Gm16198-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000116081 Gm14853-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000117118 Rpl7a-ps9-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000118615 Gm13183-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000121538 Gm14156-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000120981 Gm12593-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000118582 Gm14082-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000143678 Rpl7a-003 processed_transcript Mus_musculus 0 403
ENSMUST00000129673 Rpl7a-005 processed_transcript Mus_musculus 0 320
ENSMUST00000147143 Rpl7a-007 processed_transcript Mus_musculus 0 202
ENSMUST00000137376 Rpl7a-004 processed_transcript Mus_musculus 0 202
ENSMUST00000149339 Rpl7a-006 processed_transcript Mus_musculus 0.000000002 68

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