C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486157 RP11-342F17.2-001 ENSG00000243160 9606 + 5:79529302-79530093 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverMuscleTestisENST00000486157
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Muscle Testis
ENST00000486157 0.020±0.00 0.064±0.00 0.070±0.00 0.021±0.00 0.020±0.00 0.022±0.00 0.039±0.00 0.038±0.00 0.078±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085365 Gm16477-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000118791 Rpl7a-ps11-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000190511 RP23-58N8.1-001 processed_pseudogene Mus_musculus 0 684
ENSMUST00000102898 Rpl7a-001 protein_coding Mus_musculus 0 680
ENSMUST00000183380 Gm17828-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000190579 Rpl7a-ps10-001 processed_pseudogene Mus_musculus 0 673
ENSMUST00000090170 Rpl7a-ps3-201 protein_coding Mus_musculus 0 669
ENSMUST00000096427 Gm17415-001 processed_pseudogene Mus_musculus 0 665
ENSMUST00000145247 Gm6286-001 processed_pseudogene Mus_musculus 0 656
ENSMUST00000071172 RP23-58N8.4-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000095218 Rpl7a-ps5-201 protein_coding Mus_musculus 0 636
ENSMUST00000162120 Gm7418-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000189720 RP23-321G17.2-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000119745 Gm13864-001 processed_pseudogene Mus_musculus 0 610
ENSMUST00000191231 RP24-217I2.2-001 processed_pseudogene Mus_musculus 0 610
ENSMUST00000117398 Gm8250-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000120384 Rpl7a-ps12-001 processed_pseudogene Mus_musculus 0 601
ENSMUST00000122355 Gm11760-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000120032 Gm13666-001 processed_pseudogene Mus_musculus 0 590
ENSMUST00000171235 Gm5459-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000151645 Gm7847-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000119589 Gm16071-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000139800 Gm5353-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000165944 RP24-170M24.1-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000136269 Rpl7a-002 processed_transcript Mus_musculus 0 549
ENSMUST00000119952 Gm15836-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000137376 Rpl7a-004 processed_transcript Mus_musculus 0 510
ENSMUST00000120236 Gm14141-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000118291 Gm16166-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000118766 Gm16198-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000118615 Gm13183-001 processed_pseudogene Mus_musculus 0 468
ENSMUST00000118838 Gm11362-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000188170 RP23-248N10.1-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000120981 Gm12593-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000143678 Rpl7a-003 processed_transcript Mus_musculus 0 385
ENSMUST00000117289 Gm16394-001 processed_pseudogene Mus_musculus 0 267
ENSMUST00000177515 Gm20660-001 processed_pseudogene Mus_musculus 0 189
ENSMUST00000166414 Gm17097-001 processed_pseudogene Mus_musculus 2e-23 113
ENSMUST00000119982 Gm15007-001 processed_pseudogene Mus_musculus 0.00000000000002 84

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