C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428027 RP11-534L20.4-001 ENSG00000234981 9606 + 1:206528915-206529706 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000428027
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000428027 0.045±0.00 0.145±0.00 0.080±0.00 0.051±0.00 0.023±0.00 0.022±0.00 0.050±0.00 0.068±0.00 0.084±0.00 0.129±0.13 0.069±0.01 0.042±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085365 Gm16477-001 processed_pseudogene Mus_musculus 0 811
ENSMUST00000118791 Rpl7a-ps11-001 processed_pseudogene Mus_musculus 0 806
ENSMUST00000190511 RP23-58N8.1-001 processed_pseudogene Mus_musculus 0 800
ENSMUST00000102898 Rpl7a-001 protein_coding Mus_musculus 0 795
ENSMUST00000090170 Rpl7a-ps3-201 protein_coding Mus_musculus 0 795
ENSMUST00000094754 Rpl7a-ps8-201 protein_coding Mus_musculus 0 795
ENSMUST00000145247 Gm6286-001 processed_pseudogene Mus_musculus 0 787
ENSMUST00000096427 Gm17415-001 processed_pseudogene Mus_musculus 0 787
ENSMUST00000190579 Rpl7a-ps10-001 processed_pseudogene Mus_musculus 0 784
ENSMUST00000071172 RP23-58N8.4-001 processed_pseudogene Mus_musculus 0 782
ENSMUST00000183380 Gm17828-001 processed_pseudogene Mus_musculus 0 780
ENSMUST00000095218 Rpl7a-ps5-201 protein_coding Mus_musculus 0 773
ENSMUST00000191231 RP24-217I2.2-001 processed_pseudogene Mus_musculus 0 767
ENSMUST00000119745 Gm13864-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000162120 Gm7418-001 processed_pseudogene Mus_musculus 0 739
ENSMUST00000171235 Gm5459-001 processed_pseudogene Mus_musculus 0 726
ENSMUST00000120032 Gm13666-001 processed_pseudogene Mus_musculus 0 715
ENSMUST00000120384 Rpl7a-ps12-001 processed_pseudogene Mus_musculus 0 715
ENSMUST00000121278 Gm13726-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000136269 Rpl7a-002 processed_transcript Mus_musculus 0 684
ENSMUST00000122355 Gm11760-001 processed_pseudogene Mus_musculus 0 682
ENSMUST00000151645 Gm7847-001 processed_pseudogene Mus_musculus 0 676
ENSMUST00000117398 Gm8250-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000122273 Gm12269-001 processed_pseudogene Mus_musculus 0 662
ENSMUST00000137376 Rpl7a-004 processed_transcript Mus_musculus 0 627
ENSMUST00000118838 Gm11362-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000117439 Gm12385-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000120504 Gm12124-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000120236 Gm14141-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000185009 Gm14214-001 translated_processed_pseudogene Mus_musculus 0 606
ENSMUST00000118973 Gm15617-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000117118 Rpl7a-ps9-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000118615 Gm13183-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000120981 Gm12593-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000143678 Rpl7a-003 processed_transcript Mus_musculus 0 414
ENSMUST00000117903 Gm8097-001 processed_pseudogene Mus_musculus 0 211
ENSMUST00000162331 Gm15812-001 unprocessed_pseudogene Mus_musculus 6e-24 115
ENSMUST00000119982 Gm15007-001 processed_pseudogene Mus_musculus 0.00000000000002 84
ENSMUST00000119680 Gm15702-001 processed_pseudogene Mus_musculus 0.0000003 60

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