C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12961
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120507 Gm12961-001 ENSMUSG00000082686 10090 - 4:111790621-111791670 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000120507
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000120507 0.128±0.04 0.073±0.00 0.148±0.06 0.516±0.25 0.210±0.12 0.216±0.12 0.085±0.09 0.408±0.20 0.173±0.15 0.059±0.04 0.787±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UZ CIL_0008UZ_0002 VISTA 4:111252851-111853446

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392524 HNRNPA3-001 protein_coding Homo_sapiens 0 1120
ENST00000401429 HNRNPA3P1-001 processed_pseudogene Homo_sapiens 0 1022
ENST00000411529 HNRNPA3-002 protein_coding Homo_sapiens 0 1120
ENST00000416838 HNRNPA3P3-001 processed_pseudogene Homo_sapiens 0 1009
ENST00000424736 RP11-512F24.1-001 processed_pseudogene Homo_sapiens 0 1031
ENST00000427514 HNRNPA3P4-001 processed_pseudogene Homo_sapiens 0 628
ENST00000435711 HNRNPA3-014 protein_coding Homo_sapiens 0 1120
ENST00000437410 HNRNPA3P12-001 processed_pseudogene Homo_sapiens 0 981
ENST00000441511 AC012513.4-001 processed_pseudogene Homo_sapiens 0 616
ENST00000451198 HNRNPA3P2-001 unprocessed_pseudogene Homo_sapiens 0 237
ENST00000455201 HNRNPA3P5-001 processed_pseudogene Homo_sapiens 0 802
ENST00000472163 HNRNPA3P6-001 processed_pseudogene Homo_sapiens 0 695
ENST00000512222 HNRNPA3P13-001 processed_pseudogene Homo_sapiens 0 837
ENST00000547726 HNRNPA3P10-001 processed_pseudogene Homo_sapiens 0 1009

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