C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A3 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000451198 HNRNPA3P2-001 ENSG00000227688 9606 + 20:36620403-36621423 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000451198
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000451198 0.055±0.00 0.679±0.00 0.038±0.00 0.147±0.09 0.228±0.21 0.070±0.00 0.342±0.00 0.148±0.11 0.104±0.06 0.023±0.00 0.208±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000304 CIL_000304_0002 CGP 20:36612318-36746078

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168178 Gm6254-001 processed_pseudogene Mus_musculus 0 462
ENSMUST00000091130 Gm5641-201 protein_coding Mus_musculus 0 462
ENSMUST00000090792 Hnrnpa3-201 protein_coding Mus_musculus 0 462
ENSMUST00000164947 Hnrnpa3-202 protein_coding Mus_musculus 0 462
ENSMUST00000141974 Hnrnpa3-004 protein_coding Mus_musculus 0 462
ENSMUST00000111962 Hnrnpa3-001 protein_coding Mus_musculus 0 462
ENSMUST00000111964 Hnrnpa3-002 protein_coding Mus_musculus 0 462
ENSMUST00000117582 Gm5940-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000121942 Gm6161-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000089593 Gm7551-201 processed_pseudogene Mus_musculus 0 457
ENSMUST00000177820 Gm9242-201 protein_coding Mus_musculus 0 451
ENSMUST00000071732 Gm6793-201 protein_coding Mus_musculus 0 446
ENSMUST00000125165 Gm11847-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000161973 Gm6397-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000119652 Gm11991-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000119643 Gm6758-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000117287 Gm14398-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000120017 Gm12960-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000122378 Gm14730-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000119765 Gm9431-001 processed_pseudogene Mus_musculus 0 390
ENSMUST00000121434 Gm14052-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000119775 Gm6506-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000191574 RP24-177N20.1-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000119442 Gm13369-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000119037 Gm12986-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000120104 Gm12129-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000166043 Gm17082-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000185178 Gm17190-002 protein_coding Mus_musculus 0 283
ENSMUST00000073014 Gm8991-201 protein_coding Mus_musculus 0 278
ENSMUST00000111961 Hnrnpa3-003 protein_coding Mus_musculus 0 278
ENSMUST00000120507 Gm12961-001 processed_pseudogene Mus_musculus 0 237

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