C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A3 pseudogene 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000512222 HNRNPA3P13-001 ENSG00000250826 9606 + 4:82128535-82129656 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungMuscleOvaryTestisENST00000512222
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Muscle Ovary Testis
ENST00000512222 0.051±0.00 0.010±0.00 0.021±0.00 0.020±0.00 0.009±0.00 0.021±0.00 0.055±0.05 0.029±0.00 0.028±0.00 0.019±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090792 Hnrnpa3-201 protein_coding Mus_musculus 0 1314
ENSMUST00000111964 Hnrnpa3-002 protein_coding Mus_musculus 0 1314
ENSMUST00000117582 Gm5940-001 processed_pseudogene Mus_musculus 0 1280
ENSMUST00000091130 Gm5641-201 protein_coding Mus_musculus 0 1279
ENSMUST00000164947 Hnrnpa3-202 protein_coding Mus_musculus 0 1279
ENSMUST00000111962 Hnrnpa3-001 protein_coding Mus_musculus 0 1279
ENSMUST00000121942 Gm6161-001 processed_pseudogene Mus_musculus 0 1273
ENSMUST00000177820 Gm9242-201 protein_coding Mus_musculus 0 1273
ENSMUST00000168178 Gm6254-001 processed_pseudogene Mus_musculus 0 1260
ENSMUST00000161973 Gm6397-001 processed_pseudogene Mus_musculus 0 1253
ENSMUST00000120017 Gm12960-001 processed_pseudogene Mus_musculus 0 1251
ENSMUST00000119652 Gm11991-001 processed_pseudogene Mus_musculus 0 1229
ENSMUST00000117287 Gm14398-001 processed_pseudogene Mus_musculus 0 1205
ENSMUST00000125165 Gm11847-001 processed_pseudogene Mus_musculus 0 1205
ENSMUST00000071732 Gm6793-201 protein_coding Mus_musculus 0 1179
ENSMUST00000172004 Gm6153-001 processed_pseudogene Mus_musculus 0 1138
ENSMUST00000119643 Gm6758-001 processed_pseudogene Mus_musculus 0 1138
ENSMUST00000119775 Gm6506-001 processed_pseudogene Mus_musculus 0 1122
ENSMUST00000122378 Gm14730-001 processed_pseudogene Mus_musculus 0 1103
ENSMUST00000119765 Gm9431-001 processed_pseudogene Mus_musculus 0 1061
ENSMUST00000120104 Gm12129-001 processed_pseudogene Mus_musculus 0 1037
ENSMUST00000032395 Gm7399-001 processed_pseudogene Mus_musculus 0 987
ENSMUST00000089593 Gm7551-201 processed_pseudogene Mus_musculus 0 974
ENSMUST00000166043 Gm17082-001 processed_pseudogene Mus_musculus 0 920
ENSMUST00000191574 RP24-177N20.1-001 processed_pseudogene Mus_musculus 0 913
ENSMUST00000111961 Hnrnpa3-003 protein_coding Mus_musculus 0 846
ENSMUST00000185178 Gm17190-002 protein_coding Mus_musculus 0 839
ENSMUST00000120507 Gm12961-001 processed_pseudogene Mus_musculus 0 837
ENSMUST00000073014 Gm8991-201 protein_coding Mus_musculus 0 752
ENSMUST00000141974 Hnrnpa3-004 protein_coding Mus_musculus 0 726
ENSMUST00000184369 Gm17190-001 translated_processed_pseudogene Mus_musculus 0 723
ENSMUST00000189662 RP23-472J11.2-001 processed_pseudogene Mus_musculus 0 671
ENSMUST00000121434 Gm14052-001 processed_pseudogene Mus_musculus 0 660
ENSMUST00000117756 Gm12194-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000119037 Gm12986-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000119442 Gm13369-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000120487 Gm12229-001 processed_pseudogene Mus_musculus 0 507
ENSMUST00000167880 Sbf2-006 retained_intron Mus_musculus 0 270
ENSMUST00000132392 Hnrnpa3-005 retained_intron Mus_musculus 9e-39 165

Loading