C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A3 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000401429 HNRNPA3P1-001 ENSG00000226790 9606 - 10:43789249-43790387 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungOvaryPlacentaTestisENST00000401429
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000401429 0.109±0.00 0.101±0.00 0.034±0.00 0.044±0.00 0.413±0.00 0.011±0.00 0.033±0.00 0.057±0.03 0.037±0.01 0.039±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090792 Hnrnpa3-201 protein_coding Mus_musculus 0 1605
ENSMUST00000111964 Hnrnpa3-002 protein_coding Mus_musculus 0 1605
ENSMUST00000117582 Gm5940-001 processed_pseudogene Mus_musculus 0 1520
ENSMUST00000091130 Gm5641-201 protein_coding Mus_musculus 0 1519
ENSMUST00000164947 Hnrnpa3-202 protein_coding Mus_musculus 0 1519
ENSMUST00000111962 Hnrnpa3-001 protein_coding Mus_musculus 0 1519
ENSMUST00000121942 Gm6161-001 processed_pseudogene Mus_musculus 0 1513
ENSMUST00000177820 Gm9242-201 protein_coding Mus_musculus 0 1513
ENSMUST00000125165 Gm11847-001 processed_pseudogene Mus_musculus 0 1498
ENSMUST00000161973 Gm6397-001 processed_pseudogene Mus_musculus 0 1493
ENSMUST00000120017 Gm12960-001 processed_pseudogene Mus_musculus 0 1491
ENSMUST00000168178 Gm6254-001 processed_pseudogene Mus_musculus 0 1489
ENSMUST00000119652 Gm11991-001 processed_pseudogene Mus_musculus 0 1458
ENSMUST00000117287 Gm14398-001 processed_pseudogene Mus_musculus 0 1434
ENSMUST00000071732 Gm6793-201 protein_coding Mus_musculus 0 1424
ENSMUST00000119775 Gm6506-001 processed_pseudogene Mus_musculus 0 1358
ENSMUST00000119643 Gm6758-001 processed_pseudogene Mus_musculus 0 1351
ENSMUST00000172004 Gm6153-001 processed_pseudogene Mus_musculus 0 1345
ENSMUST00000122378 Gm14730-001 processed_pseudogene Mus_musculus 0 1338
ENSMUST00000119765 Gm9431-001 processed_pseudogene Mus_musculus 0 1284
ENSMUST00000120104 Gm12129-001 processed_pseudogene Mus_musculus 0 1260
ENSMUST00000032395 Gm7399-001 processed_pseudogene Mus_musculus 0 1182
ENSMUST00000089593 Gm7551-201 processed_pseudogene Mus_musculus 0 1112
ENSMUST00000166043 Gm17082-001 processed_pseudogene Mus_musculus 0 1107
ENSMUST00000191574 RP24-177N20.1-001 processed_pseudogene Mus_musculus 0 1098
ENSMUST00000111961 Hnrnpa3-003 protein_coding Mus_musculus 0 1064
ENSMUST00000120507 Gm12961-001 processed_pseudogene Mus_musculus 0 1022
ENSMUST00000073014 Gm8991-201 protein_coding Mus_musculus 0 911
ENSMUST00000184369 Gm17190-001 translated_processed_pseudogene Mus_musculus 0 885
ENSMUST00000141974 Hnrnpa3-004 protein_coding Mus_musculus 0 813
ENSMUST00000189662 RP23-472J11.2-001 processed_pseudogene Mus_musculus 0 808
ENSMUST00000121434 Gm14052-001 processed_pseudogene Mus_musculus 0 808
ENSMUST00000117756 Gm12194-001 processed_pseudogene Mus_musculus 0 800
ENSMUST00000119037 Gm12986-001 processed_pseudogene Mus_musculus 0 754
ENSMUST00000120487 Gm12229-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000119442 Gm13369-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000121177 Gm5383-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000132392 Hnrnpa3-005 retained_intron Mus_musculus 0 479
ENSMUST00000163579 Gm9064-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000167880 Sbf2-006 retained_intron Mus_musculus 0 340
ENSMUST00000117573 Gm15678-001 processed_pseudogene Mus_musculus 0 250

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