C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12508
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121282 Gm12508-001 ENSMUSG00000081504 10090 + 4:55254740-55255219 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderOvaryPlacentaENSMUST00000121282
Transcript ID Adrenal Bladder Ovary Placenta
ENSMUST00000121282 0.417±0.15 0.037±0.01 0.360±0.02 0.208±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001FS CIL_0001FS_0002 CGP 4:54945048-55392237

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294189 RPL29-001 protein_coding Homo_sapiens 0 366
ENST00000413677 RP4-595K12.1-001 processed_pseudogene Homo_sapiens 0 303
ENST00000440227 RPL29P7-001 processed_pseudogene Homo_sapiens 0 307
ENST00000442089 RP5-1057J7.1-001 processed_pseudogene Homo_sapiens 0 287
ENST00000443998 RP11-632C17__A.1-001 processed_pseudogene Homo_sapiens 0 344
ENST00000446953 RP1-130G2.1-001 processed_pseudogene Homo_sapiens 0 272
ENST00000451924 RP11-42D20.1-001 processed_pseudogene Homo_sapiens 0 327
ENST00000463466 RP11-874G11.1-001 processed_pseudogene Homo_sapiens 0 254
ENST00000465069 RPL29P25-001 processed_pseudogene Homo_sapiens 0 195
ENST00000465434 RPL29P24-001 processed_pseudogene Homo_sapiens 0 285
ENST00000466397 RPL29-005 protein_coding Homo_sapiens 0 366
ENST00000475248 RPL29-008 protein_coding Homo_sapiens 0 366
ENST00000478358 RP11-490G8.1-001 processed_pseudogene Homo_sapiens 0 372
ENST00000479017 RPL29-009 protein_coding Homo_sapiens 0 366
ENST00000480306 RPL29-004 nonsense_mediated_decay Homo_sapiens 6e-34 148
ENST00000481629 RPL29-003 protein_coding Homo_sapiens 7e-34 148
ENST00000482584 RP11-342F17.1-001 processed_pseudogene Homo_sapiens 0 272
ENST00000486188 RPL29P23-001 processed_pseudogene Homo_sapiens 0 207
ENST00000486565 RPL29-002 retained_intron Homo_sapiens 0.00000002 64
ENST00000486611 RPL29P3-001 processed_pseudogene Homo_sapiens 0 285
ENST00000492277 RPL29-007 protein_coding Homo_sapiens 0 366
ENST00000494408 RPL29P11-001 processed_pseudogene Homo_sapiens 0 350
ENST00000495383 RPL29-006 protein_coding Homo_sapiens 0 366
ENST00000496042 RP11-452G18.1-001 processed_pseudogene Homo_sapiens 0 189

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