C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14383
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121637 Gm14383-001 ENSMUSG00000081416 10090 + 2:119669159-119669544 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeLiverTestisENSMUST00000121637
Transcript ID Adipose Liver Testis
ENSMUST00000121637 0.157±0.00 0.042±0.00 0.216±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FB CIL_0005FB_0002 CGP 2:119655446-119735407

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230495 H3F3AP6-001 processed_pseudogene Homo_sapiens 0 420
ENST00000321285 RP11-402J6.3-001 processed_pseudogene Homo_sapiens 0 372
ENST00000366813 H3F3A-002 protein_coding Homo_sapiens 0 436
ENST00000366814 H3F3A-003 protein_coding Homo_sapiens 0 300
ENST00000366815 H3F3A-001 protein_coding Homo_sapiens 0 436
ENST00000366816 H3F3A-004 protein_coding Homo_sapiens 0 436
ENST00000369387 H3F3AP4-001 processed_pseudogene Homo_sapiens 0 436
ENST00000404612 HIST1H3PS1-001 processed_pseudogene Homo_sapiens 0 390
ENST00000416267 RP11-349N19.2-001 processed_pseudogene Homo_sapiens 0 403
ENST00000416765 RP1-22N22.1-001 processed_pseudogene Homo_sapiens 0 385
ENST00000421430 RP11-4M23.4-001 processed_pseudogene Homo_sapiens 0 315
ENST00000442718 AC019185.2-001 processed_pseudogene Homo_sapiens 3e-24 115
ENST00000509149 CTC-470C15.1-001 processed_pseudogene Homo_sapiens 0 230
ENST00000532005 RP11-745I13.1-001 processed_pseudogene Homo_sapiens 1e-34 150
ENST00000557753 RP11-452K20.1-001 processed_pseudogene Homo_sapiens 1.00053e-42 176
ENST00000559984 H3F3AP1-001 processed_pseudogene Homo_sapiens 0 196

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