C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414329 RP11-106M7.4-001 ENSG00000226428 9606 + 10:114900722-114901366 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungMuscleOvaryENST00000414329
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000414329 0.237±0.00 0.093±0.00 0.028±0.00 0.027±0.00 0.152±0.00 0.026±0.00 0.084±0.00 0.205±0.00 0.072±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019G CIL_00019G_0001 CGP 10:114821744-114977676

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112598 Rpl15-005 protein_coding Mus_musculus 0 691
ENSMUST00000079419 Rpl15-004 protein_coding Mus_musculus 0 691
ENSMUST00000100799 Rpl15-002 protein_coding Mus_musculus 0 691
ENSMUST00000080281 Rpl15-001 protein_coding Mus_musculus 0 691
ENSMUST00000088480 Rpl15-ps3-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000105169 Gm4294-201 processed_pseudogene Mus_musculus 0 678
ENSMUST00000184247 Rpl15-ps2-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000081993 Gm10020-201 protein_coding Mus_musculus 0 675
ENSMUST00000119496 Gm10224-001 processed_pseudogene Mus_musculus 0 658
ENSMUST00000097103 Gm8420-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000117717 Gm14094-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000121621 Gm12726-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000189382 RP23-277E3.1-001 processed_pseudogene Mus_musculus 0 577
ENSMUST00000120953 Gm13413-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000121890 Gm12035-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000117231 Gm11191-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000073317 Gm5292-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000120694 Rpl15-ps1-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000132957 Gm15733-001 processed_pseudogene Mus_musculus 9.80909e-45 183
ENSMUST00000122372 Rpl15-ps4-001 processed_pseudogene Mus_musculus 3.00004e-41 172

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