C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15905
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137042 Gm15905-001 ENSMUSG00000085993 10090 + 10:127921067-127921361 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderPlacentaENSMUST00000137042
Transcript ID Bladder Placenta
ENSMUST00000137042 0.146±0.00 0.392±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230495 H3F3AP6-001 processed_pseudogene Homo_sapiens 0 235
ENST00000321285 RP11-402J6.3-001 processed_pseudogene Homo_sapiens 0 237
ENST00000366813 H3F3A-002 protein_coding Homo_sapiens 0 252
ENST00000366815 H3F3A-001 protein_coding Homo_sapiens 0 252
ENST00000366816 H3F3A-004 protein_coding Homo_sapiens 0 252
ENST00000369387 H3F3AP4-001 processed_pseudogene Homo_sapiens 0 252
ENST00000404612 HIST1H3PS1-001 processed_pseudogene Homo_sapiens 0 195
ENST00000416267 RP11-349N19.2-001 processed_pseudogene Homo_sapiens 0 250
ENST00000416765 RP1-22N22.1-001 processed_pseudogene Homo_sapiens 0 215
ENST00000421430 RP11-4M23.4-001 processed_pseudogene Homo_sapiens 2.94273e-44 182
ENST00000440551 H3F3BP1-001 processed_pseudogene Homo_sapiens 0 231
ENST00000443015 AC133141.1-001 processed_pseudogene Homo_sapiens 2e-35 152
ENST00000505098 CTC-505O3.1-001 processed_pseudogene Homo_sapiens 0 220
ENST00000509149 CTC-470C15.1-001 processed_pseudogene Homo_sapiens 0 193
ENST00000559984 H3F3AP1-001 processed_pseudogene Homo_sapiens 8.96831e-44 180
ENST00000603240 RP11-27M5.1-001 processed_pseudogene Homo_sapiens 4e-22 108

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