C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 17669
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163749 Gm17669-201 ENSMUSG00000091695 10090 + 18:67562387-67562851 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastLiverLungOvaryPlacentaTestisENSMUST00000163749
Transcript ID Adipose Adrenal Bladder Brain Breast Liver Lung Ovary Placenta Testis
ENSMUST00000163749 0.109±0.00 0.317±0.12 5.156±5.03 1.832±2.36 0.190±0.04 4.312±6.11 0.121±0.00 0.212±0.01 0.155±0.02 0.157±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZP CIL_0007ZP_0002 VISTA 18:67068230-67671525

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294189 RPL29-001 protein_coding Homo_sapiens 0 351
ENST00000413677 RP4-595K12.1-001 processed_pseudogene Homo_sapiens 0 296
ENST00000440227 RPL29P7-001 processed_pseudogene Homo_sapiens 0 289
ENST00000442089 RP5-1057J7.1-001 processed_pseudogene Homo_sapiens 0 281
ENST00000443998 RP11-632C17__A.1-001 processed_pseudogene Homo_sapiens 0 335
ENST00000446953 RP1-130G2.1-001 processed_pseudogene Homo_sapiens 0 261
ENST00000451924 RP11-42D20.1-001 processed_pseudogene Homo_sapiens 0 335
ENST00000463466 RP11-874G11.1-001 processed_pseudogene Homo_sapiens 0 248
ENST00000465069 RPL29P25-001 processed_pseudogene Homo_sapiens 0 196
ENST00000465434 RPL29P24-001 processed_pseudogene Homo_sapiens 0 276
ENST00000466397 RPL29-005 protein_coding Homo_sapiens 0 351
ENST00000475248 RPL29-008 protein_coding Homo_sapiens 0 351
ENST00000478358 RP11-490G8.1-001 processed_pseudogene Homo_sapiens 0 351
ENST00000479017 RPL29-009 protein_coding Homo_sapiens 0 351
ENST00000480306 RPL29-004 nonsense_mediated_decay Homo_sapiens 4e-35 152
ENST00000481629 RPL29-003 protein_coding Homo_sapiens 4e-36 156
ENST00000482584 RP11-342F17.1-001 processed_pseudogene Homo_sapiens 0 276
ENST00000486188 RPL29P23-001 processed_pseudogene Homo_sapiens 0 198
ENST00000486565 RPL29-002 retained_intron Homo_sapiens 0.0000002 60
ENST00000486611 RPL29P3-001 processed_pseudogene Homo_sapiens 0 259
ENST00000492277 RPL29-007 protein_coding Homo_sapiens 0 351
ENST00000494408 RPL29P11-001 processed_pseudogene Homo_sapiens 0 344
ENST00000495383 RPL29-006 protein_coding Homo_sapiens 0 351
ENST00000496042 RP11-452G18.1-001 processed_pseudogene Homo_sapiens 0 198

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