C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 2308
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166539 Gm2308-001 ENSMUSG00000092257 10090 - 7:42125200-42126203 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000166539
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166539 0.337±0.26 0.104±0.06 0.158±0.01 0.132±0.08 0.841±0.84 0.122±0.07 0.387±0.10 0.127±0.10 0.123±0.11 0.096±0.00 0.303±0.09 0.180±0.08 0.183±0.15 0.028±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1229
ENST00000328713 GAPDHP24-001 processed_pseudogene Homo_sapiens 0 625
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 946
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1203
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1229
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1229
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 612
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 1003
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 922
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 1031
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 929
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 346
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 649
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 905
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 856
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1118
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 952
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 749
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 671
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 896
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 614
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 756
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 845
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 686
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 673
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 680
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 2e-35 150
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 597
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 865
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1158
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 867
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 614
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 946
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 946
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 665
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 852
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 911
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 928
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 987
ENST00000508195 RP11-616K22.1-001 processed_pseudogene Homo_sapiens 0 647
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 706
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 955
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 300
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 315
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 909
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 953
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 1014
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 627
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 878
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 763
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 763
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 660
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1083

Loading