C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 3200
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181493 Gm3200-001 ENSMUSG00000097388 10090 - 7:100760805-100761806 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000181493
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000181493 0.235±0.09 0.250±0.00 0.658±0.66 0.114±0.04 0.050±0.00 0.080±0.00 0.047±0.02 0.182±0.30 0.066±0.00 0.200±0.03 0.106±0.04 0.192±0.10 0.317±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 438
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1227
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 950
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1201
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1227
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1227
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 549
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 979
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 937
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 1029
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 900
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 324
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 630
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 898
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 848
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1105
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 944
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 763
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 669
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 894
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 590
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 726
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 854
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 689
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 682
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 673
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 9e-34 145
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 595
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 846
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1162
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 848
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 617
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 950
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 950
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 636
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 850
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 904
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 920
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 985
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 688
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 305
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 298
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 918
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 957
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 979
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 619
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 887
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 776
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 776
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 592
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1081

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