C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 6981
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182467 Gm6981-001 ENSMUSG00000098076 10090 - 9:52002274-52003281 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182467
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182467 0.510±0.23 0.171±0.07 0.173±0.00 0.533±0.27 0.267±0.12 0.175±0.10 0.202±0.10 0.310±0.19 0.213±0.12 0.319±0.04 0.324±0.16 0.605±0.29 0.719±0.63 7.789±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DH CIL_0008DH_0002 VISTA 9:51847924-52450392

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 435
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1166
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 922
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1140
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1166
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1166
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 544
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 935
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 854
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 990
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 883
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 307
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 832
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 782
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1038
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 883
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 603
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 817
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 857
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 597
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 686
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 771
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 656
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 627
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 507
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 769
ENST00000450472 GAPDHP14-001 processed_pseudogene Homo_sapiens 0 457
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1085
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 798
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 584
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 922
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 922
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 806
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 898
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 835
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 896
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 918
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 586
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 575
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1037

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