C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, beta 4B class IVB, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187481 RP23-8J15.8-001 ENSMUSG00000099997 10090 - 1:24594087-24595423 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000187481
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000187481 0.035±0.01 0.195±0.10 0.492±0.04 0.136±0.04 0.069±0.02 0.190±0.10 0.043±0.02 0.061±0.03 0.172±0.23 0.046±0.02 0.109±0.08 0.029±0.01 0.339±0.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000143702 zgc:123194-001 protein_coding Danio_rerio 0 1083
ENSDART00000061149 zgc:55461-001 protein_coding Danio_rerio 0 1050
ENSDART00000066859 tubb4b-001 protein_coding Danio_rerio 0 1013
ENSDART00000131187 tubb4b-201 protein_coding Danio_rerio 0 1007
ENSDART00000055380 tubb5-201 protein_coding Danio_rerio 0 992
ENST00000259818 TUBB2B-001 protein_coding Homo_sapiens 0 1179
ENST00000290377 TUBBP5-002 processed_transcript Homo_sapiens 0 1134
ENST00000308911 RP11-683L23.1-201 protein_coding Homo_sapiens 0 1168
ENST00000327892 TUBB-001 protein_coding Homo_sapiens 0 1116
ENST00000330914 TUBB-002 protein_coding Homo_sapiens 0 1070
ENST00000333628 TUBB2A-001 protein_coding Homo_sapiens 0 1195
ENST00000340384 TUBB4B-001 protein_coding Homo_sapiens 0 1543
ENST00000383564 TUBB-001 protein_coding Homo_sapiens 0 1116
ENST00000396384 TUBB-004 protein_coding Homo_sapiens 0 1072
ENST00000396389 TUBB-003 protein_coding Homo_sapiens 0 1062
ENST00000400530 TUBB-004 protein_coding Homo_sapiens 0 1072
ENST00000400531 TUBB-002 protein_coding Homo_sapiens 0 1070
ENST00000400534 TUBB-003 protein_coding Homo_sapiens 0 1062
ENST00000404155 TUBB2BP1-001 unprocessed_pseudogene Homo_sapiens 0 625
ENST00000405234 TUBBP9-001 processed_pseudogene Homo_sapiens 0 442
ENST00000405796 TUBB3P1-001 processed_pseudogene Homo_sapiens 0 725
ENST00000406999 TUBB4BP7-001 processed_pseudogene Homo_sapiens 0 808
ENST00000412136 TUBB-003 protein_coding Homo_sapiens 0 1062
ENST00000413547 TUBB-002 protein_coding Homo_sapiens 0 1070
ENST00000415481 TUBB8P11-001 unprocessed_pseudogene Homo_sapiens 0 900
ENST00000416519 TUBBP6-001 processed_pseudogene Homo_sapiens 0 874
ENST00000419551 TUBB-003 protein_coding Homo_sapiens 0 1062
ENST00000419792 TUBB-001 protein_coding Homo_sapiens 0 1116
ENST00000420400 TUBB-003 protein_coding Homo_sapiens 0 1062
ENST00000420618 TUBB-004 protein_coding Homo_sapiens 0 1072
ENST00000421473 TUBB-001 protein_coding Homo_sapiens 0 1116
ENST00000422650 TUBB-001 protein_coding Homo_sapiens 0 1116
ENST00000422674 TUBB-001 protein_coding Homo_sapiens 0 1116
ENST00000422712 TUBB1P2-001 unprocessed_pseudogene Homo_sapiens 0 795
ENST00000424734 TUBB-003 protein_coding Homo_sapiens 0 1062
ENST00000425102 TUBB-004 protein_coding Homo_sapiens 0 1072
ENST00000425136 TUBB-003 protein_coding Homo_sapiens 0 1062
ENST00000426754 TUBB-003 protein_coding Homo_sapiens 0 1062
ENST00000427480 TUBB-002 protein_coding Homo_sapiens 0 1070
ENST00000428444 TUBB7P-001 unprocessed_pseudogene Homo_sapiens 0 1079
ENST00000432462 TUBB-001 protein_coding Homo_sapiens 0 1116
ENST00000435546 TUBB-002 protein_coding Homo_sapiens 0 1070
ENST00000436335 TUBB-002 protein_coding Homo_sapiens 0 1070
ENST00000436628 TUBB-001 protein_coding Homo_sapiens 0 1116
ENST00000436895 TUBB8P6-001 unprocessed_pseudogene Homo_sapiens 0 878
ENST00000437490 TUBB-002 protein_coding Homo_sapiens 0 1070
ENST00000444441 TUBB-004 protein_coding Homo_sapiens 0 1072
ENST00000444710 AC008069.2-001 processed_pseudogene Homo_sapiens 0 507
ENST00000446385 TUBB-004 protein_coding Homo_sapiens 0 1072
ENST00000447235 TUBB8P1-001 processed_pseudogene Homo_sapiens 0 464
ENST00000447903 TUBB8-201 protein_coding Homo_sapiens 0 1079
ENST00000453350 TUBB-004 protein_coding Homo_sapiens 0 1072
ENST00000454125 TUBB4BP2-001 processed_pseudogene Homo_sapiens 0 401
ENST00000454454 TUBB-002 protein_coding Homo_sapiens 0 1070
ENST00000454620 TUBB-004 protein_coding Homo_sapiens 0 1072
ENST00000458717 TUBB8P8-001 unprocessed_pseudogene Homo_sapiens 0 918
ENST00000473006 TUBB2B-002 processed_transcript Homo_sapiens 0 1125
ENST00000503144 TUBB1P1-001 unprocessed_pseudogene Homo_sapiens 0 872
ENST00000508529 TUBBP5-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1134
ENST00000511806 TUBB8P4-001 unprocessed_pseudogene Homo_sapiens 0 832
ENST00000554689 RP11-88E18.1-001 processed_pseudogene Homo_sapiens 0 497
ENST00000561967 TUBB8-007 protein_coding Homo_sapiens 0 1134
ENST00000562809 TUBB8-002 protein_coding Homo_sapiens 0 743
ENST00000563456 TUBB8-003 retained_intron Homo_sapiens 0 510
ENST00000563927 TUBB8P7-001 processed_transcript Homo_sapiens 0 935
ENST00000564130 TUBB8-005 protein_coding Homo_sapiens 0 985
ENST00000564451 TUBB8P7-004 processed_transcript Homo_sapiens 0 935
ENST00000567207 TUBB8P7-002 processed_transcript Homo_sapiens 0 1112
ENST00000567466 TUBB8-006 nonsense_mediated_decay Homo_sapiens 0 540
ENST00000567960 TUBB8P7-003 polymorphic_pseudogene Homo_sapiens 0 1112
ENST00000568584 TUBB8-001 protein_coding Homo_sapiens 0 1223
ENST00000568866 TUBB8-008 protein_coding Homo_sapiens 0 985
ENST00000573909 RP11-683L23.1-002 protein_coding Homo_sapiens 0 957
ENST00000594555 RP11-683L23.1-005 processed_transcript Homo_sapiens 0 492
ENST00000604929 TUBB4B-002 retained_intron Homo_sapiens 0 1271

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