C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8420
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097103 Gm8420-001 ENSMUSG00000072324 10090 - 1:51940664-51941261 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000097103
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000097103 0.381±0.16 0.049±0.02 0.222±0.04 0.125±0.00 1.618±1.83 0.140±0.07 0.085±0.00 0.034±0.01 0.217±0.09 0.211±0.09 2.185±3.72 0.068±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AM CIL_0009AM_0002 VISTA 1:51779533-52380137

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307839 RPL15-001 protein_coding Homo_sapiens 0 802
ENST00000354811 RPL15-007 protein_coding Homo_sapiens 0 802
ENST00000391491 RPL15P3-001 processed_pseudogene Homo_sapiens 0 785
ENST00000412097 RPL15-011 protein_coding Homo_sapiens 0 699
ENST00000413699 RPL15-002 protein_coding Homo_sapiens 0 802
ENST00000414329 RP11-106M7.4-001 processed_pseudogene Homo_sapiens 0 599
ENST00000415719 RPL15-013 protein_coding Homo_sapiens 0 802
ENST00000416278 RP11-570G20.1-001 processed_pseudogene Homo_sapiens 0 580
ENST00000416625 RPL15P4-001 processed_pseudogene Homo_sapiens 0 374
ENST00000417590 RPL15P4-001 processed_pseudogene Homo_sapiens 0 374
ENST00000419391 RPL15P4-001 processed_pseudogene Homo_sapiens 0 374
ENST00000422218 RPL15-009 protein_coding Homo_sapiens 0 518
ENST00000422772 AC093107.7-001 processed_pseudogene Homo_sapiens 0 619
ENST00000422915 RP1-40G4P.1-001 processed_pseudogene Homo_sapiens 0 457
ENST00000429515 AC097523.1-001 processed_pseudogene Homo_sapiens 0 531
ENST00000432924 RPL15P18-001 processed_pseudogene Homo_sapiens 0 689
ENST00000434031 RPL15-014 protein_coding Homo_sapiens 0 712
ENST00000435882 RPL15-005 protein_coding Homo_sapiens 0 802
ENST00000436146 RPL15-008 nonsense_mediated_decay Homo_sapiens 0 750
ENST00000439829 AP002381.2-001 processed_pseudogene Homo_sapiens 0 597
ENST00000445480 RPL15P4-001 processed_pseudogene Homo_sapiens 0 374
ENST00000450413 RPL15P4-001 processed_pseudogene Homo_sapiens 0 374
ENST00000451666 RPL15P4-001 processed_pseudogene Homo_sapiens 0 374
ENST00000456043 RPL15P4-001 processed_pseudogene Homo_sapiens 0 368
ENST00000456530 RPL15-201 protein_coding Homo_sapiens 0 449
ENST00000457032 RPL15P4-001 processed_pseudogene Homo_sapiens 0 368
ENST00000465786 RPL15-006 retained_intron Homo_sapiens 0 418
ENST00000475247 RP11-214O14.1-001 processed_pseudogene Homo_sapiens 0 525
ENST00000475768 AP000797.1-001 processed_pseudogene Homo_sapiens 0 527
ENST00000477936 RP11-113C12.2-001 processed_pseudogene Homo_sapiens 0 630
ENST00000482912 RPL15P20-001 processed_pseudogene Homo_sapiens 0 569
ENST00000487352 RP11-100N21.1-001 processed_pseudogene Homo_sapiens 0 747
ENST00000490223 RPL15-004 retained_intron Homo_sapiens 0 577
ENST00000490252 RPL15P2-001 processed_pseudogene Homo_sapiens 0 647
ENST00000611050 RPL15-202 protein_coding Homo_sapiens 0 802

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