C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein SA pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418207 RPSAP9-001 ENSG00000234618 9606 + 9:76398699-76399586 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000418207
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000418207 0.213±0.00 0.169±0.00 0.073±0.00 0.127±0.03 0.295±0.00 0.053±0.00 0.034±0.00 0.170±0.00 0.200±0.00 0.106±0.00 0.032±0.00 0.222±0.13 0.302±0.19 0.733±0.51

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057740 Rpsa-ps10-201 protein_coding Mus_musculus 0 1062
ENSMUST00000035105 Rpsa-201 protein_coding Mus_musculus 0 1051
ENSMUST00000120702 Rpsa-ps9-001 processed_pseudogene Mus_musculus 0 1027
ENSMUST00000121691 Rpsa-ps4-001 processed_pseudogene Mus_musculus 0 1002
ENSMUST00000120596 Rpsa-ps12-001 processed_pseudogene Mus_musculus 0 972
ENSMUST00000191040 Rpsa-ps1-001 processed_pseudogene Mus_musculus 0 957
ENSMUST00000118446 Rpsa-ps11-001 processed_pseudogene Mus_musculus 0 952
ENSMUST00000120191 Gm11824-001 processed_pseudogene Mus_musculus 0 924
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 905
ENSMUST00000118817 Gm5764-001 processed_pseudogene Mus_musculus 0 736
ENSMUST00000186198 RP23-2I19.1-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000059546 Rpsa-ps2-201 processed_pseudogene Mus_musculus 0 628
ENSDART00000135945 rpsa-001 protein_coding Danio_rerio 0 586
ENSMUST00000162286 Gm16228-001 processed_pseudogene Mus_musculus 0 254

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