C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437653 RP11-809F4.2-001 ENSG00000230362 9606 - 3:175977497-175978570 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000437653
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000437653 0.093±0.00 0.123±0.00 0.139±0.00 0.068±0.00 0.021±0.00 0.018±0.00 0.192±0.00 0.036±0.00 0.100±0.00 0.046±0.00 0.099±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 843
ENSMUST00000121430 Gm12715-001 processed_pseudogene Mus_musculus 0 743
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 743
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 743
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 732
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 699
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 695
ENSMUST00000120059 Gm5388-001 processed_pseudogene Mus_musculus 0 571
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 549
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 0 545
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 0 545
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 0 545
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 0 545
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 538
ENSDART00000066430 acta2-201 protein_coding Danio_rerio 0 505
ENSDART00000149990 acta2-001 protein_coding Danio_rerio 0 505
ENSMUST00000118518 Gm12003-001 processed_pseudogene Mus_musculus 0 483
ENSDART00000080664 protein_coding Danio_rerio 0 470
ENSMUST00000062147 Actg1-006 protein_coding Mus_musculus 0 307
ENSMUST00000089616 Actg1-009 protein_coding Mus_musculus 7e-20 102

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