C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000442812 RP11-377K22.2-001 ENSG00000225475 9606 - 1:56619409-56619549 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyMuscleENST00000442812
Transcript ID Adipose Adrenal Colon Kidney Muscle
ENST00000442812 0.336±0.00 0.181±0.00 0.174±0.00 0.177±0.00 0.449±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005E CIL_00005E_0002 CGP 1:56494747-56715335

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177599 Gm5070-001 processed_pseudogene Mus_musculus 3e-40 167
ENSMUST00000170335 Rps2-ps10-002 processed_transcript Mus_musculus 8.99999e-40 165
ENSMUST00000117071 Gm11249-001 processed_pseudogene Mus_musculus 8.99999e-40 165
ENSMUST00000117295 Rps2-ps13-001 processed_pseudogene Mus_musculus 8.99999e-40 165
ENSMUST00000121722 Gm12366-001 processed_pseudogene Mus_musculus 8.99999e-40 165
ENSMUST00000071458 Gm4968-001 processed_pseudogene Mus_musculus 8.99999e-40 165
ENSMUST00000184266 Rps2-ps5-001 processed_pseudogene Mus_musculus 8.99999e-40 165
ENSMUST00000079261 Gm6139-001 processed_pseudogene Mus_musculus 8.99999e-40 165
ENSMUST00000073790 Gm6311-201 pseudogene Mus_musculus 8.99999e-40 165
ENSMUST00000095471 Rps2-ps6-201 protein_coding Mus_musculus 8.99999e-40 165
ENSMUST00000085368 Gm5786-201 protein_coding Mus_musculus 8.99999e-40 165
ENSMUST00000166546 Gm18025-201 protein_coding Mus_musculus 8.99999e-40 165
ENSMUST00000076842 Rps2-ps10-001 transcribed_processed_pseudogene Mus_musculus 1e-38 161
ENSMUST00000075898 Gm5921-001 processed_pseudogene Mus_musculus 4e-38 159
ENSMUST00000122167 Gm16061-001 processed_pseudogene Mus_musculus 4e-38 159
ENSMUST00000169678 Gm6576-201 protein_coding Mus_musculus 4e-38 159
ENSMUST00000118911 Gm11687-001 processed_pseudogene Mus_musculus 2e-36 154
ENSMUST00000165577 Gm17150-001 processed_pseudogene Mus_musculus 3e-35 150
ENSMUST00000118720 Gm11599-001 processed_pseudogene Mus_musculus 3e-35 150
ENSMUST00000118634 Gm6433-001 processed_pseudogene Mus_musculus 9e-35 148
ENSMUST00000117512 Gm7222-001 processed_pseudogene Mus_musculus 9e-35 148
ENSMUST00000146791 Gm12091-001 processed_pseudogene Mus_musculus 3e-25 117

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