C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 17150
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165577 Gm17150-001 ENSMUSG00000091410 10090 + 19:58790195-58790575 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165577
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165577 0.488±0.37 0.165±0.00 0.131±0.02 0.230±0.00 0.587±0.39 0.210±0.00 0.235±0.15 0.158±0.07 0.323±0.25 0.166±0.00 0.216±0.01 0.685±0.18 0.419±0.56 2.047±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OG CIL_0002OG_0002 CGP 19:58785803-58860984

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314255 RPS2P28-001 processed_pseudogene Homo_sapiens 0 322
ENST00000343262 RPS2-001 protein_coding Homo_sapiens 0 427
ENST00000397318 RPS2P55-001 processed_pseudogene Homo_sapiens 0 422
ENST00000402069 RP3-337H4.6-001 processed_pseudogene Homo_sapiens 0 444
ENST00000423464 RP11-183G22.1-001 processed_pseudogene Homo_sapiens 0 370
ENST00000438210 RP3-342P20.2-001 processed_pseudogene Homo_sapiens 0 350
ENST00000441047 RPS2P48-001 processed_pseudogene Homo_sapiens 0 405
ENST00000442812 RP11-377K22.2-001 processed_pseudogene Homo_sapiens 3e-35 150
ENST00000443417 RPS2P35-001 processed_pseudogene Homo_sapiens 0 403
ENST00000445918 RP11-388B24.4-001 processed_pseudogene Homo_sapiens 0 279
ENST00000449856 AC022210.2-001 processed_pseudogene Homo_sapiens 0 420
ENST00000459634 RP11-192C21.1-001 processed_pseudogene Homo_sapiens 0 331
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 398
ENST00000488803 RPS2P5-001 processed_pseudogene Homo_sapiens 0 427
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 377
ENST00000526522 RPS2-006 protein_coding Homo_sapiens 0 390
ENST00000526586 RPS2-015 protein_coding Homo_sapiens 0 200
ENST00000527109 RPS2-005 retained_intron Homo_sapiens 0 387
ENST00000527871 RPS2-004 retained_intron Homo_sapiens 0 387
ENST00000529806 RPS2-008 protein_coding Homo_sapiens 0 407
ENST00000530225 RPS2-017 protein_coding Homo_sapiens 0 200
ENST00000531065 RPS2-003 retained_intron Homo_sapiens 0 427
ENST00000532746 RPS2-012 nonsense_mediated_decay Homo_sapiens 0 427
ENST00000533161 RPS2-002 retained_intron Homo_sapiens 0 387
ENST00000533186 RPS2-013 protein_coding Homo_sapiens 0 427
ENST00000533872 RPS2-011 retained_intron Homo_sapiens 0 427
ENST00000554490 RPS2P2-001 processed_pseudogene Homo_sapiens 0 294
ENST00000610837 RP11-19G24.1-001 processed_pseudogene Homo_sapiens 0 363
ENST00000612648 CTB-75G16.1-001 processed_pseudogene Homo_sapiens 0 361

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