C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443010 AC097639.8-001 ENSG00000237433 9606 + 3:32190747-32191627 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyMuscleOvaryPlacentaTestisENST00000443010
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Muscle Ovary Placenta Testis
ENST00000443010 0.055±0.00 0.098±0.00 0.021±0.00 0.021±0.00 0.019±0.00 0.020±0.00 0.016±0.00 0.113±0.02 0.092±0.02 0.031±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057740 Rpsa-ps10-201 protein_coding Mus_musculus 0 977
ENSMUST00000035105 Rpsa-201 protein_coding Mus_musculus 0 961
ENSMUST00000120702 Rpsa-ps9-001 processed_pseudogene Mus_musculus 0 950
ENSMUST00000121691 Rpsa-ps4-001 processed_pseudogene Mus_musculus 0 928
ENSMUST00000120596 Rpsa-ps12-001 processed_pseudogene Mus_musculus 0 876
ENSMUST00000120191 Gm11824-001 processed_pseudogene Mus_musculus 0 867
ENSMUST00000191040 Rpsa-ps1-001 processed_pseudogene Mus_musculus 0 852
ENSMUST00000118446 Rpsa-ps11-001 processed_pseudogene Mus_musculus 0 852
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 806
ENSMUST00000120514 Gm9097-001 processed_pseudogene Mus_musculus 0 737
ENSMUST00000117607 Gm9095-001 processed_pseudogene Mus_musculus 0 732
ENSMUST00000118817 Gm5764-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000186198 RP23-2I19.1-001 processed_pseudogene Mus_musculus 0 632
ENSDART00000135945 rpsa-001 protein_coding Danio_rerio 0 590
ENSMUST00000059546 Rpsa-ps2-201 processed_pseudogene Mus_musculus 0 555
ENSMUST00000121121 Gm14666-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000162286 Gm16228-001 processed_pseudogene Mus_musculus 0 211

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