C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444599 RP11-366O20.5-001 ENSG00000235332 9606 - 9:125194649-125195821 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartLiverLungMuscleOvaryTestisENST00000444599
Transcript ID Adrenal Breast Colon Heart Liver Lung Muscle Ovary Testis
ENST00000444599 0.018±0.00 0.018±0.00 0.017±0.00 0.016±0.00 0.061±0.00 0.049±0.00 0.015±0.00 0.031±0.01 0.146±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057740 Rpsa-ps10-201 protein_coding Mus_musculus 0 878
ENSMUST00000035105 Rpsa-201 protein_coding Mus_musculus 0 867
ENSMUST00000120702 Rpsa-ps9-001 processed_pseudogene Mus_musculus 0 856
ENSMUST00000121691 Rpsa-ps4-001 processed_pseudogene Mus_musculus 0 817
ENSMUST00000120596 Rpsa-ps12-001 processed_pseudogene Mus_musculus 0 815
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 793
ENSMUST00000191040 Rpsa-ps1-001 processed_pseudogene Mus_musculus 0 785
ENSMUST00000118446 Rpsa-ps11-001 processed_pseudogene Mus_musculus 0 758
ENSMUST00000120191 Gm11824-001 processed_pseudogene Mus_musculus 0 750
ENSMUST00000186198 RP23-2I19.1-001 processed_pseudogene Mus_musculus 0 566
ENSMUST00000059546 Rpsa-ps2-201 processed_pseudogene Mus_musculus 0 549
ENSDART00000135945 rpsa-001 protein_coding Danio_rerio 0 507
ENSMUST00000162286 Gm16228-001 processed_pseudogene Mus_musculus 0 228

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