C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000483479 RP11-179A18.1-001 ENSG00000244722 9606 - 3:110682286-110683154 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryTestisENST00000483479
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000483479 0.123±0.00 0.243±0.00 0.020±0.00 0.097±0.00 0.123±0.00 0.056±0.00 0.033±0.00 0.387±0.28 0.016±0.00 0.125±0.00 0.152±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057740 Rpsa-ps10-201 protein_coding Mus_musculus 0 939
ENSMUST00000035105 Rpsa-201 protein_coding Mus_musculus 0 922
ENSMUST00000120702 Rpsa-ps9-001 processed_pseudogene Mus_musculus 0 905
ENSMUST00000121691 Rpsa-ps4-001 processed_pseudogene Mus_musculus 0 889
ENSMUST00000120596 Rpsa-ps12-001 processed_pseudogene Mus_musculus 0 854
ENSMUST00000118446 Rpsa-ps11-001 processed_pseudogene Mus_musculus 0 835
ENSMUST00000191040 Rpsa-ps1-001 processed_pseudogene Mus_musculus 0 824
ENSMUST00000120191 Gm11824-001 processed_pseudogene Mus_musculus 0 811
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 804
ENSMUST00000186198 RP23-2I19.1-001 processed_pseudogene Mus_musculus 0 592
ENSDART00000135945 rpsa-001 protein_coding Danio_rerio 0 523
ENSMUST00000059546 Rpsa-ps2-201 processed_pseudogene Mus_musculus 0 488
ENSMUST00000162286 Gm16228-001 processed_pseudogene Mus_musculus 0 279

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