C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 20545
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174739 Gm20545-001 ENSMUSG00000092428 10090 - 17:36226815-36227024 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyLiverPlacentaENSMUST00000174739
Transcript ID Bladder Kidney Liver Placenta
ENSMUST00000174739 0.329±0.01 1.326±0.00 0.620±0.37 0.152±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230495 H3F3AP6-001 processed_pseudogene Homo_sapiens 0 311
ENST00000321285 RP11-402J6.3-001 processed_pseudogene Homo_sapiens 0 283
ENST00000366813 H3F3A-002 protein_coding Homo_sapiens 0 311
ENST00000366815 H3F3A-001 protein_coding Homo_sapiens 0 311
ENST00000366816 H3F3A-004 protein_coding Homo_sapiens 0 311
ENST00000369387 H3F3AP4-001 processed_pseudogene Homo_sapiens 0 311
ENST00000404612 HIST1H3PS1-001 processed_pseudogene Homo_sapiens 0 244
ENST00000416267 RP11-349N19.2-001 processed_pseudogene Homo_sapiens 0 302
ENST00000440551 H3F3BP1-001 processed_pseudogene Homo_sapiens 0 302
ENST00000443015 AC133141.1-001 processed_pseudogene Homo_sapiens 0 207
ENST00000475267 H3F3AP5-001 processed_pseudogene Homo_sapiens 0 279
ENST00000496255 RP11-473P24.2-001 processed_pseudogene Homo_sapiens 0 246
ENST00000505098 CTC-505O3.1-001 processed_pseudogene Homo_sapiens 0 279
ENST00000509149 CTC-470C15.1-001 processed_pseudogene Homo_sapiens 0 250
ENST00000532005 RP11-745I13.1-001 processed_pseudogene Homo_sapiens 1.99993e-41 172
ENST00000557753 RP11-452K20.1-001 processed_pseudogene Homo_sapiens 0 196
ENST00000559984 H3F3AP1-001 processed_pseudogene Homo_sapiens 0 220
ENST00000603240 RP11-27M5.1-001 processed_pseudogene Homo_sapiens 4e-27 124
ENST00000619270 CTD-2062A1.2-001 processed_pseudogene Homo_sapiens 1e-27 126

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