C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: H3 histone, family 3C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119459 H3f3c-001 ENSMUSG00000082029 10090 - 2:119665626-119666036 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119459
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119459 3.827±1.06 1.150±0.66 15.460±8.39 2.388±0.91 0.553±0.18 1.561±1.03 0.920±0.55 16.540±24.21 1.961±1.15 0.304±0.14 2.339±0.57 0.444±0.18 0.896±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005FB CIL_0005FB_0002 CGP 2:119655446-119735407

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230495 H3F3AP6-001 processed_pseudogene Homo_sapiens 0 638
ENST00000321285 RP11-402J6.3-001 processed_pseudogene Homo_sapiens 0 590
ENST00000366813 H3F3A-002 protein_coding Homo_sapiens 0 654
ENST00000366814 H3F3A-003 protein_coding Homo_sapiens 0 440
ENST00000366815 H3F3A-001 protein_coding Homo_sapiens 0 654
ENST00000366816 H3F3A-004 protein_coding Homo_sapiens 0 654
ENST00000369387 H3F3AP4-001 processed_pseudogene Homo_sapiens 0 654
ENST00000404612 HIST1H3PS1-001 processed_pseudogene Homo_sapiens 0 525
ENST00000416267 RP11-349N19.2-001 processed_pseudogene Homo_sapiens 0 603
ENST00000416765 RP1-22N22.1-001 processed_pseudogene Homo_sapiens 0 545
ENST00000421430 RP11-4M23.4-001 processed_pseudogene Homo_sapiens 0 475
ENST00000440551 H3F3BP1-001 processed_pseudogene Homo_sapiens 0 606
ENST00000443015 AC133141.1-001 processed_pseudogene Homo_sapiens 0 346
ENST00000475267 H3F3AP5-001 processed_pseudogene Homo_sapiens 0 584
ENST00000496255 RP11-473P24.2-001 processed_pseudogene Homo_sapiens 0 438
ENST00000497682 H3F3AP3-001 processed_pseudogene Homo_sapiens 0 551
ENST00000505098 CTC-505O3.1-001 processed_pseudogene Homo_sapiens 0 516
ENST00000509149 CTC-470C15.1-001 processed_pseudogene Homo_sapiens 0 285
ENST00000532005 RP11-745I13.1-001 processed_pseudogene Homo_sapiens 0 248
ENST00000557753 RP11-452K20.1-001 processed_pseudogene Homo_sapiens 0 348
ENST00000559063 CTD-2651B20.2-001 processed_pseudogene Homo_sapiens 0 475
ENST00000559984 H3F3AP1-001 processed_pseudogene Homo_sapiens 0 346
ENST00000603240 RP11-27M5.1-001 processed_pseudogene Homo_sapiens 1e-37 159
ENST00000619270 CTD-2062A1.2-001 processed_pseudogene Homo_sapiens 0 278

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