C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10709
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098994 Gm10709-201 ENSMUSG00000074516 10090 + 9:7751672-7752325 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098994
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098994 0.892±0.13 0.859±0.46 0.380±0.02 4.673±4.43 0.947±0.30 0.944±0.53 0.411±0.19 0.918±0.36 0.565±0.31 0.568±0.17 0.092±0.00 1.304±0.66 0.709±0.72 1.010±0.60

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000111140 RPL29-201 protein_coding Danio_rerio 0 202
ENST00000294189 RPL29-001 protein_coding Homo_sapiens 0 433
ENST00000413677 RP4-595K12.1-001 processed_pseudogene Homo_sapiens 0 315
ENST00000440227 RPL29P7-001 processed_pseudogene Homo_sapiens 0 313
ENST00000442089 RP5-1057J7.1-001 processed_pseudogene Homo_sapiens 0 303
ENST00000443998 RP11-632C17__A.1-001 processed_pseudogene Homo_sapiens 0 361
ENST00000446953 RP1-130G2.1-001 processed_pseudogene Homo_sapiens 0 289
ENST00000451924 RP11-42D20.1-001 processed_pseudogene Homo_sapiens 0 350
ENST00000463466 RP11-874G11.1-001 processed_pseudogene Homo_sapiens 0 235
ENST00000465069 RPL29P25-001 processed_pseudogene Homo_sapiens 0 206
ENST00000465434 RPL29P24-001 processed_pseudogene Homo_sapiens 0 291
ENST00000466397 RPL29-005 protein_coding Homo_sapiens 0 392
ENST00000470368 RPL29P30-002 processed_transcript Homo_sapiens 0 302
ENST00000475248 RPL29-008 protein_coding Homo_sapiens 0 392
ENST00000478358 RP11-490G8.1-001 processed_pseudogene Homo_sapiens 0 377
ENST00000479017 RPL29-009 protein_coding Homo_sapiens 0 398
ENST00000480306 RPL29-004 nonsense_mediated_decay Homo_sapiens 0 215
ENST00000481629 RPL29-003 protein_coding Homo_sapiens 0 209
ENST00000482584 RP11-342F17.1-001 processed_pseudogene Homo_sapiens 0 294
ENST00000486188 RPL29P23-001 processed_pseudogene Homo_sapiens 0 224
ENST00000486565 RPL29-002 retained_intron Homo_sapiens 1e-24 117
ENST00000486611 RPL29P3-001 processed_pseudogene Homo_sapiens 0 279
ENST00000488409 RPL29P2-001 transcribed_processed_pseudogene Homo_sapiens 0 278
ENST00000492277 RPL29-007 protein_coding Homo_sapiens 0 392
ENST00000494408 RPL29P11-001 processed_pseudogene Homo_sapiens 0 392
ENST00000495383 RPL29-006 protein_coding Homo_sapiens 0 392
ENST00000496042 RP11-452G18.1-001 processed_pseudogene Homo_sapiens 0 217
ENST00000496414 RPL29P30-003 processed_transcript Homo_sapiens 0 294
ENST00000498671 RPL29P2-002 processed_transcript Homo_sapiens 0 291

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