C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 10327
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105222 Gm10327-001 ENSMUSG00000071343 10090 - 10:33808497-33809498 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000105222
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105222 1.570±0.73 0.362±0.11 0.829±0.60 0.782±0.28 2.471±1.56 0.497±0.25 2.187±0.40 1.430±0.39 0.644±0.53 0.347±0.12 1.574±0.79 1.218±0.99 0.270±0.22 0.342±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NV CIL_0001NV_0005 CGP 10:33766424-33879475

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 429
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1221
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 933
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1195
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1221
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1221
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 549
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 979
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 904
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 1018
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 889
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 322
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 640
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 881
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 826
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1088
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 917
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 747
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 867
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 601
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 739
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 843
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 678
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 664
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 684
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 9e-34 145
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 573
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 819
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1146
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 837
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 608
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 933
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 933
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 625
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 857
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 898
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 893
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 974
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 689
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 276
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 291
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 918
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 924
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 974
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 614
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 773
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 865
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 754
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 754
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 597
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1075

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