C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11953
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122352 Gm11953-001 ENSMUSG00000082816 10090 + 11:3951714-3952716 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000122352
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000122352 0.350±0.21 0.057±0.01 0.410±0.18 0.264±0.21 0.608±0.52 0.142±0.06 0.151±0.04 0.302±0.22 0.196±0.25 0.095±0.03 0.180±0.10 0.576±0.56 0.090±0.06 0.099±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 348
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1094
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 870
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1074
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1094
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1094
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 477
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 846
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 793
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 904
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 789
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 298
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 534
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 795
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 743
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 968
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 833
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 686
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 573
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 776
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 809
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 525
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 652
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 730
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 590
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 569
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 2e-35 150
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 490
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 719
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1026
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 763
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 540
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 870
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 870
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 531
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 769
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 821
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 787
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 881
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 593
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 809
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 300
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 763
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 852
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 865
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 542
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 767
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 704
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 704
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 508
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1000

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