C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 3839
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181173 Gm3839-001 ENSMUSG00000097148 10090 - 14:11280735-11356726 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000181173
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000181173 0.367±0.13 0.115±0.05 0.938±0.59 0.781±0.39 0.112±0.05 0.160±0.07 0.256±0.19 0.183±0.08 1.356±0.77 0.047±0.02 0.375±0.14 0.290±0.25 0.418±0.11 0.270±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004365 IEA glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
GO:0006006 IEA glucose metabolic process
GO:0006096 IEA glycolytic process
GO:0016620 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0050661 IEA NADP binding
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 473
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1284
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 1007
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1258
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1284
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1284
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 560
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 996
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 937
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 1040
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 917
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 324
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 647
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 904
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 848
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1127
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 950
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 763
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 669
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 900
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 606
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 756
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 859
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 695
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 684
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 678
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 9e-34 145
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 584
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 846
ENST00000450472 GAPDHP14-001 processed_pseudogene Homo_sapiens 0 503
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1168
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 859
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 669
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 1007
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 1007
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 641
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 878
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 931
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 926
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 1002
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 701
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 294
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 309
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 924
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 968
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 996
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 636
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 898
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 793
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 793
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 608
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1144

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