C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 29610
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187749 RP23-305F24.2-001 ENSMUSG00000099694 10090 + 1:43270683-43271135 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENSMUST00000187749
Transcript ID Brain Testis
ENSMUST00000187749 0.101±0.00 0.147±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00010G CIL_00010G_0002 CGP 1:43123074-43570515

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332968 RPL17-C18orf32-003 protein_coding Homo_sapiens 0 442
ENST00000394133 RP11-624L12.1-001 processed_pseudogene Homo_sapiens 0 420
ENST00000404330 RPL17P25-001 processed_pseudogene Homo_sapiens 0 388
ENST00000414070 RP11-20O24.4-001 processed_pseudogene Homo_sapiens 0 460
ENST00000417063 AC020983.5-001 processed_pseudogene Homo_sapiens 0 388
ENST00000418495 RPL17-201 protein_coding Homo_sapiens 0 477
ENST00000420302 RP11-215A21.2-001 processed_pseudogene Homo_sapiens 0 436
ENST00000422360 RPL17P43-001 processed_pseudogene Homo_sapiens 0 368
ENST00000432914 AC069154.4-001 processed_pseudogene Homo_sapiens 0 307
ENST00000442115 RP11-11M20.2-001 processed_pseudogene Homo_sapiens 4e-29 132
ENST00000444020 RP11-1029M24.1-001 processed_pseudogene Homo_sapiens 0 390
ENST00000446498 RP3-476K8.4-001 processed_pseudogene Homo_sapiens 0 436
ENST00000447415 RP4-612B15.2-001 processed_pseudogene Homo_sapiens 0 416
ENST00000448403 RP11-383G10.3-001 processed_pseudogene Homo_sapiens 0 407
ENST00000452862 AC144530.1-001 processed_pseudogene Homo_sapiens 0 416
ENST00000467688 RPL17P22-001 processed_pseudogene Homo_sapiens 0 412
ENST00000471722 RP4-706A16.3-001 processed_pseudogene Homo_sapiens 0 460
ENST00000498103 RP11-592N21.1-001 processed_pseudogene Homo_sapiens 0 460
ENST00000498256 RPL17P33-001 processed_pseudogene Homo_sapiens 0 449
ENST00000560214 RP11-14C10.2-001 processed_pseudogene Homo_sapiens 2e-38 163
ENST00000577910 RPL17-C18orf32-002 nonsense_mediated_decay Homo_sapiens 0 477
ENST00000578532 RPL17-017 protein_coding Homo_sapiens 0 444
ENST00000579248 RPL17-018 protein_coding Homo_sapiens 0 477
ENST00000579408 RPL17-003 protein_coding Homo_sapiens 0 477
ENST00000579820 C18orf32-201 protein_coding Homo_sapiens 0 442
ENST00000580210 RPL17-015 protein_coding Homo_sapiens 0 477
ENST00000580261 RPL17-001 protein_coding Homo_sapiens 0 477
ENST00000580387 RPL17-019 protein_coding Homo_sapiens 0 302
ENST00000581091 RPL17-012 processed_transcript Homo_sapiens 0 440
ENST00000581373 RPL17-002 protein_coding Homo_sapiens 0 477
ENST00000581741 RPL17-009 retained_intron Homo_sapiens 0 303
ENST00000582588 RPL17-020 retained_intron Homo_sapiens 0 254
ENST00000583036 RPL17-008 protein_coding Homo_sapiens 0 344
ENST00000583637 RPL17-016 protein_coding Homo_sapiens 0 460
ENST00000584364 RPL17-014 retained_intron Homo_sapiens 0 477
ENST00000584895 RPL17-C18orf32-001 protein_coding Homo_sapiens 0 442
ENST00000615760 RPL17-024 protein_coding Homo_sapiens 0 309
ENST00000617346 RPL17-022 protein_coding Homo_sapiens 0 442
ENST00000618613 RPL17-202 protein_coding Homo_sapiens 0 477
ENST00000618619 RPL17-023 protein_coding Homo_sapiens 0 477

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